NPs Basic Information

Name
xanthoquinodin B9
Molecular Formula C31H24O11
IUPAC Name*
methyl5,7,12,20,22-pentahydroxy-24-methyl-9,18,27-trioxo-14-oxaheptacyclo[15.10.2.01,19.03,16.06,15.08,13.021,26]nonacosa-3,5,7,15,19,21(26),22,24,28-nonaene-13-carboxylate
SMILES
COC(=O)C12Oc3c(c(O)cc4c3C3C=CC5(C4)C(=O)c4cc(C)cc(O)c4C(O)=C5C3=O)C(O)=C1C(=O)CCC2O
InChI
InChI=1S/C31H24O11/c1-11-7-14-20(16(33)8-11)25(37)23-24(36)13-5-6-30(23,28(14)39)10-12-9-17(34)21-26(38)22-15(32)3-4-18(35)31(22,29(40)41-2)42-27(21)19(12)13/h5-9,13,18,33-35,37-38H,3-4,10H2,1-2H3/t13-,18-,30-,31+/m0/s1
InChIKey
HVHUQDDJNAABOF-INRCXLCWSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Xanthenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte IDEndophyte NameFamilyGenusTaxonomy IDGenBank IDClosest GenBank IDReference
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NPs Physi-Chem Properties

Molecular Weight: 572.52 ALogp: 2.6
HBD: 5 HBA: 11
Rotatable Bonds: 1 Lipinski's rule of five: Rejected
Polar Surface Area: 187.9 Aromatic Rings: 8
Heavy Atoms: 42 QED Weighted: 0.249

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.659 MDCK Permeability: 0.00001450
Pgp-inhibitor: 0.28 Pgp-substrate: 0.603
Human Intestinal Absorption (HIA): 0.835 20% Bioavailability (F20%): 0.977
30% Bioavailability (F30%): 0.916

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.007 Plasma Protein Binding (PPB): 90.95%
Volume Distribution (VD): 0.505 Fu: 3.22%

ADMET: Metabolism

CYP1A2-inhibitor: 0.08 CYP1A2-substrate: 0.757
CYP2C19-inhibitor: 0.04 CYP2C19-substrate: 0.065
CYP2C9-inhibitor: 0.198 CYP2C9-substrate: 0.246
CYP2D6-inhibitor: 0.175 CYP2D6-substrate: 0.155
CYP3A4-inhibitor: 0.803 CYP3A4-substrate: 0.226

ADMET: Excretion

Clearance (CL): 0.821 Half-life (T1/2): 0.015

ADMET: Toxicity

hERG Blockers: 0.053 Human Hepatotoxicity (H-HT): 0.207
Drug-inuced Liver Injury (DILI): 0.92 AMES Toxicity: 0.219
Rat Oral Acute Toxicity: 0.916 Maximum Recommended Daily Dose: 0.912
Skin Sensitization: 0.08 Carcinogencity: 0.046
Eye Corrosion: 0.003 Eye Irritation: 0.004
Respiratory Toxicity: 0.153
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

*Note: the compound similarity was calculated by RDKIT.