NPs Basic Information

Name
Xanthoquinodin A1
Molecular Formula C31H24O11
IUPAC Name*
methyl (1R,7R,8S,17S)-8,13,15,20,22-pentahydroxy-24-methyl-11,18,27-trioxo-6-oxaheptacyclo[15.10.2.01,19.03,16.05,14.07,12.021,26]nonacosa-3,5(14),12,15,19,21(26),22,24,28-nonaene-7-carboxylate
SMILES
CC1=CC2=C(C(=C1)O)C(=C3C(=O)[C@H]4C=C[C@]3(C2=O)CC5=CC6=C(C(=C45)O)C(=C7C(=O)CC[C@@H]([C@@]7(O6)C(=O)OC)O)O)O
InChI
InChI=1S/C31H24O11/c1-11-7-14-20(16(33)8-11)26(37)23-24(35)13-5-6-30(23,28(14)39)10-12-9-17-21(25(36)19(12)13)27(38)22-15(32)3-4-18(34)31(22,42-17)29(40)41-2/h5-9,13,18,33-34,36-38H,3-4,10H2,1-2H3/t13-,18-,30-,31-/m0/s1
InChIKey
XCWGCTNGDUDAMO-SLAVHBLRSA-N
Synonyms
Xanthoquinodin A1; 151063-27-3; Methyl (1R,7R,8S,17S)-8,13,15,20,22-pentahydroxy-24-methyl-11,18,27-trioxo-6-oxaheptacyclo[15.10.2.01,19.03,16.05,14.07,12.021,26]nonacosa-3,5(14),12,15,19,21(26),22,24,28-nonaene-7-carboxylate; (4R,4aS,7aS,15R)-rel-2,3,4,7,8,13,15,17-octahydro-1,4,12,14,16-pentahydroxy-10-methyl-8,13,17-trioxo-4aH-7a,15-ethenonaphtho[2',3':4,5]cyclohepta[1,2-b]xanthene-4a-carboxylic acid, methyl ester; Xanthoquinodin A1_130144; CHEMBL2333571; HY-N8252; CS-0141881; 2,3,4,7,8,14,15,17-Octahydro-1,4alpha,12,13,16-pentahydroxy-10-methyl-8,14,17-trioxo-4aH-7abeta,15beta-ethenonaphtho[2',3':4,5]cyclohepta[1,2-b]xanthene-4abeta-carboxylic acid methyl ester
CAS NA
PubChem CID 21676964
ChEMBL ID CHEMBL2333571
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Xanthenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 572.5 ALogp: 3.0
HBD: 5 HBA: 11
Rotatable Bonds: 2 Lipinski's rule of five: Rejected
Polar Surface Area: 188.0 Aromatic Rings: 8
Heavy Atoms: 42 QED Weighted: 0.249

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.745 MDCK Permeability: 0.00001270
Pgp-inhibitor: 0.318 Pgp-substrate: 0.946
Human Intestinal Absorption (HIA): 0.794 20% Bioavailability (F20%): 0.982
30% Bioavailability (F30%): 0.964

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.016 Plasma Protein Binding (PPB): 87.15%
Volume Distribution (VD): 0.618 Fu: 5.15%

ADMET: Metabolism

CYP1A2-inhibitor: 0.115 CYP1A2-substrate: 0.873
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.065
CYP2C9-inhibitor: 0.188 CYP2C9-substrate: 0.132
CYP2D6-inhibitor: 0.136 CYP2D6-substrate: 0.151
CYP3A4-inhibitor: 0.756 CYP3A4-substrate: 0.216

ADMET: Excretion

Clearance (CL): 1.174 Half-life (T1/2): 0.019

ADMET: Toxicity

hERG Blockers: 0.055 Human Hepatotoxicity (H-HT): 0.209
Drug-inuced Liver Injury (DILI): 0.872 AMES Toxicity: 0.123
Rat Oral Acute Toxicity: 0.909 Maximum Recommended Daily Dose: 0.956
Skin Sensitization: 0.205 Carcinogencity: 0.141
Eye Corrosion: 0.003 Eye Irritation: 0.005
Respiratory Toxicity: 0.668
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006102 0.870 D07VLY 0.270
ENC002945 0.711 D0C9XJ 0.270
ENC002486 0.420 D01XDL 0.268
ENC006116 0.411 D01XWG 0.267
ENC003816 0.406 D0H1AR 0.259
ENC000983 0.398 D0R9WP 0.252
ENC000710 0.398 D07JHH 0.248
ENC000954 0.398 D07MGA 0.248
ENC006117 0.381 D0T5XN 0.247
ENC004265 0.380 D0FX2Q 0.246
*Note: the compound similarity was calculated by RDKIT.