NPs Basic Information

Name
Xanthoquinodin A3
Molecular Formula C31H24O11
IUPAC Name*
methyl (1R,7R,13S)-11,16,18-trihydroxy-20-methyl-9,14,23-trioxo-7-[(2S)-5-oxooxolan-2-yl]-6-oxahexacyclo[11.10.2.01,15.03,12.05,10.017,22]pentacosa-3,5(10),11,15,17(22),18,20,24-octaene-7-carboxylate
SMILES
CC1=CC2=C(C(=C1)O)C(=C3C(=O)[C@H]4C=C[C@]3(C2=O)CC5=CC6=C(C(=O)C[C@@](O6)([C@@H]7CCC(=O)O7)C(=O)OC)C(=C45)O)O
InChI
InChI=1S/C31H24O11/c1-12-7-15-22(16(32)8-12)27(37)24-25(35)14-5-6-30(24,28(15)38)10-13-9-18-23(26(36)21(13)14)17(33)11-31(42-18,29(39)40-2)19-3-4-20(34)41-19/h5-9,14,19,32,36-37H,3-4,10-11H2,1-2H3/t14-,19-,30-,31+/m0/s1
InChIKey
JUSHCXMJWBJGNO-CLEZSSNSSA-N
Synonyms
Xanthoquinodin A3; Xanthoquinodin A3_130145; CHEMBL2333573
CAS NA
PubChem CID 71720663
ChEMBL ID CHEMBL2333573
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 572.5 ALogp: 3.1
HBD: 3 HBA: 11
Rotatable Bonds: 3 Lipinski's rule of five: Rejected
Polar Surface Area: 174.0 Aromatic Rings: 8
Heavy Atoms: 42 QED Weighted: 0.353

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.234 MDCK Permeability: 0.00001930
Pgp-inhibitor: 0.148 Pgp-substrate: 0.011
Human Intestinal Absorption (HIA): 0.192 20% Bioavailability (F20%): 0.02
30% Bioavailability (F30%): 0.916

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.024 Plasma Protein Binding (PPB): 80.94%
Volume Distribution (VD): 0.582 Fu: 8.48%

ADMET: Metabolism

CYP1A2-inhibitor: 0.641 CYP1A2-substrate: 0.446
CYP2C19-inhibitor: 0.148 CYP2C19-substrate: 0.063
CYP2C9-inhibitor: 0.497 CYP2C9-substrate: 0.311
CYP2D6-inhibitor: 0.426 CYP2D6-substrate: 0.114
CYP3A4-inhibitor: 0.787 CYP3A4-substrate: 0.213

ADMET: Excretion

Clearance (CL): 2.16 Half-life (T1/2): 0.062

ADMET: Toxicity

hERG Blockers: 0.03 Human Hepatotoxicity (H-HT): 0.168
Drug-inuced Liver Injury (DILI): 0.938 AMES Toxicity: 0.198
Rat Oral Acute Toxicity: 0.758 Maximum Recommended Daily Dose: 0.894
Skin Sensitization: 0.31 Carcinogencity: 0.792
Eye Corrosion: 0.003 Eye Irritation: 0.009
Respiratory Toxicity: 0.12
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002421 0.711 D07MGA 0.255
ENC006102 0.638 D01XDL 0.251
ENC006113 0.473 D01XWG 0.251
ENC006114 0.416 D07VLY 0.247
ENC003348 0.401 D0C9XJ 0.247
ENC005885 0.377 D0T8EH 0.242
ENC005733 0.367 D01UBX 0.239
ENC002486 0.358 D0H1AR 0.235
ENC005734 0.350 D0FX2Q 0.233
ENC002742 0.346 D03RTK 0.230
*Note: the compound similarity was calculated by RDKIT.