NPs Basic Information

Name
4-O-α-D-ribofuranose-2-pentyl-3-phemethylol
Molecular Formula C17H26O6
IUPAC Name*
2-(hydroxymethyl)-5-[2-(hydroxymethyl)-3-pentylphenoxy]oxolane-3,4-diol
SMILES
CCCCCc1cccc(OC2OC(CO)C(O)C2O)c1CO
InChI
InChI=1S/C17H26O6/c1-2-3-4-6-11-7-5-8-13(12(11)9-18)22-17-16(21)15(20)14(10-19)23-17/h5,7-8,14-21H,2-4,6,9-10H2,1H3/t14-,15?,16?,17+/m1/s1
InChIKey
GOJLCMNPYADOOU-VXLLPVPCSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 326.39 ALogp: 0.7
HBD: 4 HBA: 6
Rotatable Bonds: 8 Lipinski's rule of five: Accepted
Polar Surface Area: 99.4 Aromatic Rings: 2
Heavy Atoms: 23 QED Weighted: 0.535

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.154 MDCK Permeability: 0.00011013
Pgp-inhibitor: 0.001 Pgp-substrate: 0.012
Human Intestinal Absorption (HIA): 0.591 20% Bioavailability (F20%): 0.011
30% Bioavailability (F30%): 0.121

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.367 Plasma Protein Binding (PPB): 78.56%
Volume Distribution (VD): 0.888 Fu: 21.80%

ADMET: Metabolism

CYP1A2-inhibitor: 0.049 CYP1A2-substrate: 0.088
CYP2C19-inhibitor: 0.016 CYP2C19-substrate: 0.067
CYP2C9-inhibitor: 0.002 CYP2C9-substrate: 0.185
CYP2D6-inhibitor: 0.023 CYP2D6-substrate: 0.454
CYP3A4-inhibitor: 0.01 CYP3A4-substrate: 0.092

ADMET: Excretion

Clearance (CL): 3.681 Half-life (T1/2): 0.8

ADMET: Toxicity

hERG Blockers: 0.03 Human Hepatotoxicity (H-HT): 0.015
Drug-inuced Liver Injury (DILI): 0.089 AMES Toxicity: 0.487
Rat Oral Acute Toxicity: 0.075 Maximum Recommended Daily Dose: 0.003
Skin Sensitization: 0.13 Carcinogencity: 0.186
Eye Corrosion: 0.003 Eye Irritation: 0.021
Respiratory Toxicity: 0.023
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004787 0.733 D06BQU 0.566
ENC005773 0.467 D01TNW 0.327
ENC000851 0.446 D01WUA 0.312
ENC005772 0.446 D07XSN 0.294
ENC004076 0.434 D0Y7DP 0.294
ENC005608 0.412 D0T5BC 0.286
ENC003628 0.390 D0HR8Z 0.284
ENC003625 0.390 D0H3KI 0.284
ENC003068 0.384 D07NSU 0.284
ENC001062 0.384 D0H2RI 0.284
*Note: the compound similarity was calculated by RDKIT.