NPs Basic Information

Name
sorbicilliside B
Molecular Formula C18H26O8
IUPAC Name*
1-[4-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-2-hydroxy-5-methylphenyl]-6-hydroxyhexan-1-one
SMILES
Cc1cc(C(=O)CCCCCO)c(O)cc1OC1OC(CO)C(O)C1O
InChI
InChI=1S/C18H26O8/c1-10-7-11(12(21)5-3-2-4-6-19)13(22)8-14(10)25-18-17(24)16(23)15(9-20)26-18/h7-8,15-20,22-24H,2-6,9H2,1H3/t15-,16+,17+,18-/m1/s1
InChIKey
RHBGIKOFDWBADG-VSZNYVQBSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 370.4 ALogp: 0.3
HBD: 5 HBA: 8
Rotatable Bonds: 9 Lipinski's rule of five: Accepted
Polar Surface Area: 136.7 Aromatic Rings: 2
Heavy Atoms: 26 QED Weighted: 0.316

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.473 MDCK Permeability: 0.00008970
Pgp-inhibitor: 0.006 Pgp-substrate: 0.101
Human Intestinal Absorption (HIA): 0.906 20% Bioavailability (F20%): 0.052
30% Bioavailability (F30%): 0.974

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.819 Plasma Protein Binding (PPB): 56.91%
Volume Distribution (VD): 0.488 Fu: 42.86%

ADMET: Metabolism

CYP1A2-inhibitor: 0.041 CYP1A2-substrate: 0.071
CYP2C19-inhibitor: 0.017 CYP2C19-substrate: 0.116
CYP2C9-inhibitor: 0.002 CYP2C9-substrate: 0.297
CYP2D6-inhibitor: 0.009 CYP2D6-substrate: 0.174
CYP3A4-inhibitor: 0.016 CYP3A4-substrate: 0.069

ADMET: Excretion

Clearance (CL): 6.986 Half-life (T1/2): 0.626

ADMET: Toxicity

hERG Blockers: 0.024 Human Hepatotoxicity (H-HT): 0.08
Drug-inuced Liver Injury (DILI): 0.609 AMES Toxicity: 0.659
Rat Oral Acute Toxicity: 0.088 Maximum Recommended Daily Dose: 0.011
Skin Sensitization: 0.072 Carcinogencity: 0.348
Eye Corrosion: 0.003 Eye Irritation: 0.018
Respiratory Toxicity: 0.042
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004787 0.522 D06BQU 0.400
ENC005772 0.494 D0G5AG 0.308
ENC004773 0.467 D05ZYM 0.294
ENC004797 0.426 D0S7DV 0.286
ENC001625 0.415 D0T5BC 0.279
ENC004909 0.411 D0H3KI 0.275
ENC004798 0.411 D01TNW 0.274
ENC005169 0.404 D0H3WI 0.272
ENC003752 0.373 D07XSN 0.272
ENC004076 0.370 D0Y7DP 0.272
*Note: the compound similarity was calculated by RDKIT.