NPs Basic Information

Name
3,4-dimethoxyphenyl alpha-D-ribofuranoside
Molecular Formula C13H18O7
IUPAC Name*
(2R,3R,4S,5R)-2-(3,4-dimethoxyphenoxy)-5-(hydroxymethyl)oxolane-3,4-diol
SMILES
COC1=C(C=C(C=C1)O[C@@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O)OC
InChI
InChI=1S/C13H18O7/c1-17-8-4-3-7(5-9(8)18-2)19-13-12(16)11(15)10(6-14)20-13/h3-5,10-16H,6H2,1-2H3/t10-,11-,12-,13+/m1/s1
InChIKey
OZHRNJRMDDEEBR-LPWJVIDDSA-N
Synonyms
3,4-dimethoxyphenyl alpha-D-ribofuranoside
CAS NA
PubChem CID 146682839
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 286.28 ALogp: -0.5
HBD: 3 HBA: 7
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 97.6 Aromatic Rings: 2
Heavy Atoms: 20 QED Weighted: 0.699

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.363 MDCK Permeability: 0.00005130
Pgp-inhibitor: 0.002 Pgp-substrate: 0.184
Human Intestinal Absorption (HIA): 0.022 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.087

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.649 Plasma Protein Binding (PPB): 43.57%
Volume Distribution (VD): 0.796 Fu: 24.19%

ADMET: Metabolism

CYP1A2-inhibitor: 0.09 CYP1A2-substrate: 0.565
CYP2C19-inhibitor: 0.025 CYP2C19-substrate: 0.845
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0.489
CYP2D6-inhibitor: 0.014 CYP2D6-substrate: 0.867
CYP3A4-inhibitor: 0.011 CYP3A4-substrate: 0.135

ADMET: Excretion

Clearance (CL): 5.987 Half-life (T1/2): 0.836

ADMET: Toxicity

hERG Blockers: 0.112 Human Hepatotoxicity (H-HT): 0.147
Drug-inuced Liver Injury (DILI): 0.153 AMES Toxicity: 0.351
Rat Oral Acute Toxicity: 0.027 Maximum Recommended Daily Dose: 0.008
Skin Sensitization: 0.466 Carcinogencity: 0.718
Eye Corrosion: 0.025 Eye Irritation: 0.257
Respiratory Toxicity: 0.093
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001625 0.671 D06BQU 0.447
ENC005772 0.500 D01TNW 0.330
ENC005615 0.494 D0B8UJ 0.329
ENC003813 0.442 D0Y7DP 0.329
ENC004797 0.439 D07XSN 0.329
ENC002201 0.438 D0TC7C 0.328
ENC003752 0.436 D0I9HF 0.321
ENC004773 0.434 D09GYT 0.319
ENC005169 0.426 D0H3KI 0.303
ENC004787 0.424 D0H2RI 0.303
*Note: the compound similarity was calculated by RDKIT.