NPs Basic Information

Name
cyclo-(Gly-Ala)
Molecular Formula C5H8N2O2
IUPAC Name*
3-methylpiperazine-2,5-dione
SMILES
CC1NC(=O)CNC1=O
InChI
InChI=1S/C5H8N2O2/c1-3-5(9)6-2-4(8)7-3/h3H,2H2,1H3,(H,6,9)(H,7,8)
InChIKey
ICCHEGCKVBMSTF-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 128.13 ALogp: -1.4
HBD: 2 HBA: 2
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 58.2 Aromatic Rings: 1
Heavy Atoms: 9 QED Weighted: 0.446

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.321 MDCK Permeability: 0.00000937
Pgp-inhibitor: 0 Pgp-substrate: 0.094
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.004

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.997 Plasma Protein Binding (PPB): 7.80%
Volume Distribution (VD): 0.696 Fu: 88.15%

ADMET: Metabolism

CYP1A2-inhibitor: 0.013 CYP1A2-substrate: 0.092
CYP2C19-inhibitor: 0.034 CYP2C19-substrate: 0.074
CYP2C9-inhibitor: 0.03 CYP2C9-substrate: 0.073
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.136
CYP3A4-inhibitor: 0.006 CYP3A4-substrate: 0.077

ADMET: Excretion

Clearance (CL): 4.003 Half-life (T1/2): 0.686

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.058
Drug-inuced Liver Injury (DILI): 0.027 AMES Toxicity: 0.012
Rat Oral Acute Toxicity: 0.026 Maximum Recommended Daily Dose: 0.018
Skin Sensitization: 0.25 Carcinogencity: 0.009
Eye Corrosion: 0.004 Eye Irritation: 0.036
Respiratory Toxicity: 0.125
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000904 0.375 D0K8IX 0.265
ENC001910 0.367 D0WB9V 0.263
ENC002257 0.349 D01HNL 0.262
ENC001820 0.326 D05OQJ 0.261
ENC004743 0.326 D0Q4XQ 0.250
ENC002258 0.326 D05LEO 0.200
ENC005483 0.311 D02WFK 0.194
ENC001905 0.310 D0U5RT 0.190
ENC000991 0.310 D0Q9YT 0.186
ENC000882 0.310 D0E0WQ 0.184
*Note: the compound similarity was calculated by RDKIT.