NPs Basic Information

Name
xylariahgin A
Molecular Formula C11H12O4
IUPAC Name*
4-(4-ethyl-5-oxooxolan-2-yl)pyran-2-one
SMILES
CCC1CC(c2ccoc(=O)c2)OC1=O
InChI
InChI=1S/C11H12O4/c1-2-7-5-9(15-11(7)13)8-3-4-14-10(12)6-8/h3-4,6-7,9H,2,5H2,1H3/t7-,9-/m1/s1
InChIKey
KTJVQZRMTKSKHC-VXNVDRBHSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 208.21 ALogp: 1.7
HBD: 0 HBA: 4
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 56.5 Aromatic Rings: 2
Heavy Atoms: 15 QED Weighted: 0.699

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.562 MDCK Permeability: 0.00003040
Pgp-inhibitor: 0.045 Pgp-substrate: 0.003
Human Intestinal Absorption (HIA): 0.005 20% Bioavailability (F20%): 0.009
30% Bioavailability (F30%): 0.915

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.861 Plasma Protein Binding (PPB): 72.96%
Volume Distribution (VD): 0.75 Fu: 47.57%

ADMET: Metabolism

CYP1A2-inhibitor: 0.333 CYP1A2-substrate: 0.485
CYP2C19-inhibitor: 0.456 CYP2C19-substrate: 0.166
CYP2C9-inhibitor: 0.203 CYP2C9-substrate: 0.294
CYP2D6-inhibitor: 0.03 CYP2D6-substrate: 0.317
CYP3A4-inhibitor: 0.09 CYP3A4-substrate: 0.38

ADMET: Excretion

Clearance (CL): 9.763 Half-life (T1/2): 0.56

ADMET: Toxicity

hERG Blockers: 0.087 Human Hepatotoxicity (H-HT): 0.125
Drug-inuced Liver Injury (DILI): 0.19 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.194 Maximum Recommended Daily Dose: 0.659
Skin Sensitization: 0.124 Carcinogencity: 0.465
Eye Corrosion: 0.069 Eye Irritation: 0.574
Respiratory Toxicity: 0.82
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005453 0.474 D08SKH 0.239
ENC004862 0.317 D05EPM 0.235
ENC005451 0.308 D06BYV 0.227
ENC005452 0.294 D06HLY 0.217
ENC006021 0.268 D0K7LU 0.213
ENC004027 0.264 D07MGA 0.212
ENC000292 0.245 D0Z8EX 0.211
ENC002869 0.244 D0Z9NZ 0.208
ENC004861 0.242 D0U5RT 0.208
ENC004766 0.242 D0S5CH 0.208
*Note: the compound similarity was calculated by RDKIT.