NPs Basic Information

Name
xylariahgin B
Molecular Formula C11H14O5
IUPAC Name*
2-ethyl-4-hydroxy-4-(2-oxopyran-4-yl)butanoicacid
SMILES
CCC(CC(O)c1ccoc(=O)c1)C(=O)O
InChI
InChI=1S/C11H14O5/c1-2-7(11(14)15)5-9(12)8-3-4-16-10(13)6-8/h3-4,6-7,9,12H,2,5H2,1H3,(H,14,15)/t7-,9-/m1/s1
InChIKey
RERBHOPNELBYHM-VXNVDRBHSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 226.23 ALogp: 1.2
HBD: 2 HBA: 4
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 87.7 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.796

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.203 MDCK Permeability: 0.00060643
Pgp-inhibitor: 0.001 Pgp-substrate: 0.898
Human Intestinal Absorption (HIA): 0.409 20% Bioavailability (F20%): 0.16
30% Bioavailability (F30%): 0.994

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.267 Plasma Protein Binding (PPB): 67.52%
Volume Distribution (VD): 0.244 Fu: 23.70%

ADMET: Metabolism

CYP1A2-inhibitor: 0.02 CYP1A2-substrate: 0.098
CYP2C19-inhibitor: 0.028 CYP2C19-substrate: 0.057
CYP2C9-inhibitor: 0.011 CYP2C9-substrate: 0.947
CYP2D6-inhibitor: 0.034 CYP2D6-substrate: 0.151
CYP3A4-inhibitor: 0.009 CYP3A4-substrate: 0.068

ADMET: Excretion

Clearance (CL): 7.621 Half-life (T1/2): 0.829

ADMET: Toxicity

hERG Blockers: 0.024 Human Hepatotoxicity (H-HT): 0.163
Drug-inuced Liver Injury (DILI): 0.053 AMES Toxicity: 0.008
Rat Oral Acute Toxicity: 0.136 Maximum Recommended Daily Dose: 0.293
Skin Sensitization: 0.176 Carcinogencity: 0.56
Eye Corrosion: 0.021 Eye Irritation: 0.595
Respiratory Toxicity: 0.619
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005452 0.745 D0I3RO 0.281
ENC003984 0.323 D0A5JP 0.279
ENC005860 0.323 D0O6IU 0.267
ENC003983 0.323 D04PHC 0.258
ENC000890 0.315 D0I8FI 0.258
ENC005450 0.308 D0R1QE 0.258
ENC006123 0.290 D07MOX 0.250
ENC004766 0.279 D08HVR 0.250
ENC000306 0.278 D0RA5Q 0.244
ENC005253 0.277 D08HUC 0.239
*Note: the compound similarity was calculated by RDKIT.