NPs Basic Information

Name
xylariahgin C
Molecular Formula C12H16O5
IUPAC Name*
methyl2-ethyl-4-hydroxy-4-(2-oxopyran-4-yl)butanoate
SMILES
CCC(CC(O)c1ccoc(=O)c1)C(=O)OC
InChI
InChI=1S/C12H16O5/c1-3-8(12(15)16-2)6-10(13)9-4-5-17-11(14)7-9/h4-5,7-8,10,13H,3,6H2,1-2H3/t8-,10-/m1/s1
InChIKey
LCKQEIINCJLKRI-PSASIEDQSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 240.25 ALogp: 1.3
HBD: 1 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 76.7 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.793

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.598 MDCK Permeability: 0.00011995
Pgp-inhibitor: 0.001 Pgp-substrate: 0.286
Human Intestinal Absorption (HIA): 0.045 20% Bioavailability (F20%): 0.017
30% Bioavailability (F30%): 0.959

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.877 Plasma Protein Binding (PPB): 46.76%
Volume Distribution (VD): 0.64 Fu: 64.14%

ADMET: Metabolism

CYP1A2-inhibitor: 0.133 CYP1A2-substrate: 0.591
CYP2C19-inhibitor: 0.181 CYP2C19-substrate: 0.314
CYP2C9-inhibitor: 0.062 CYP2C9-substrate: 0.478
CYP2D6-inhibitor: 0.017 CYP2D6-substrate: 0.264
CYP3A4-inhibitor: 0.027 CYP3A4-substrate: 0.481

ADMET: Excretion

Clearance (CL): 9.663 Half-life (T1/2): 0.81

ADMET: Toxicity

hERG Blockers: 0.057 Human Hepatotoxicity (H-HT): 0.247
Drug-inuced Liver Injury (DILI): 0.096 AMES Toxicity: 0.012
Rat Oral Acute Toxicity: 0.149 Maximum Recommended Daily Dose: 0.654
Skin Sensitization: 0.202 Carcinogencity: 0.381
Eye Corrosion: 0.012 Eye Irritation: 0.258
Respiratory Toxicity: 0.753
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005451 0.745 D0U0OT 0.284
ENC005860 0.348 D02XJY 0.267
ENC000833 0.316 D0I8FI 0.246
ENC003984 0.309 D03XTC 0.238
ENC003983 0.309 D0K4MH 0.236
ENC001982 0.303 D06REO 0.235
ENC005564 0.299 D0O6IU 0.234
ENC001413 0.297 D0HD9K 0.233
ENC004221 0.295 D01JFT 0.233
ENC005450 0.294 D0K5CB 0.230
*Note: the compound similarity was calculated by RDKIT.