NPs Basic Information

Name
Daidzin
Molecular Formula C21H20O9
IUPAC Name*
3-(4-hydroxyphenyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SMILES
C1=CC(=CC=C1C2=COC3=C(C2=O)C=CC(=C3)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O
InChI
InChI=1S/C21H20O9/c22-8-16-18(25)19(26)20(27)21(30-16)29-12-5-6-13-15(7-12)28-9-14(17(13)24)10-1-3-11(23)4-2-10/h1-7,9,16,18-23,25-27H,8H2/t16-,18-,19+,20-,21-/m1/s1
InChIKey
KYQZWONCHDNPDP-QNDFHXLGSA-N
Synonyms
Daidzin; 552-66-9; Daidzoside; Daidzein 7-O-glucoside; Daidzein 7-glucoside; daidzein-7-o-glucoside; daidzein 7-O-beta-D-glucoside; 7-(beta-D-Glucopyranosyloxy)-3-(4-hydroxyphenyl)-4H-1-benzopyran-4-one; 3-(4-hydroxyphenyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one; CHEBI:42202; 4R2X91A5M5; Daidzein-7-glucoside; 3-(4-hydroxyphenyl)-7-(((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)-4H-chromen-4-one; DZN; BRN 0059741; Dadzin; UNII-4R2X91A5M5; NPI 031D; 2vle; MFCD00017466; DAIDZIN [USP-RS]; 7-O-beta-D-glucopyranoside; Daidzin, analytical standard; 4-18-00-01808 (Beilstein Handbook Reference); MLS006010640; BIDD:ER0154; DAIDZEIN DAIDZIN [MI]; SCHEMBL315373; CHEMBL486422; MEGxp0_000530; NPI-031D; ACon1_002092; DTXSID00862180; Daidzin, >=95.0% (HPLC); 3-(4-hydroxyphenyl)-7-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]oxy-chromen-4-one; Daidzein 7-O-|A-D-glucopyranoside; HY-N0018; ZINC4098610; Daidzein 7-O-beta-D-glucopyranoside; 7-(beta-D-glucopyranosyloxy)-3-(4-hydroxyphenyl)-4H-chromen-4-one; BDBM50409029; STL565871; 7,4'-Dihydroxyisoflavone 7-glucoside; CCG-208383; CS-4237; DB02115; DAIDZEIN 7-O-.BETA.-D-GLUCOSIDE; NCGC00163532-02; NCGC00163532-03; NCGC00179839-01; AS-35078; SMR001833087; 4',7-Dihydroxyisoflavone 7-O-b-D-glucopyranoside; A830561; DAIDZIN (CONSTITUENT OF ASTRAGALUS) [DSC]; Daidzin, primary pharmaceutical reference standard; Q-100628; Q3814656; DAIDZIN (CONSTITUENT OF SOY ISOFLAVONES) [DSC]; 4',7-DIHYDROXYISOFLAVONE; 7-O-B-D-GLUCOPYRANOSIDE; Daidzin, United States Pharmacopeia (USP) Reference Standard; 3-(4-hydroxyphenyl)-4-oxo-4H-chromen-7-yl beta-D-glucopyranoside; 3-(4-hydroxyphenyl)-7-((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yloxy)-4H-chromen-4-one
CAS 552-66-9
PubChem CID 107971
ChEMBL ID CHEMBL486422
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Isoflavonoids
        • Subclass: Isoflavonoid O-glycosides
          • Direct Parent: Isoflavonoid O-glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 416.4 ALogp: 0.7
HBD: 5 HBA: 9
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 146.0 Aromatic Rings: 4
Heavy Atoms: 30 QED Weighted: 0.415

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -6.101 MDCK Permeability: 0.00001190
Pgp-inhibitor: 0.008 Pgp-substrate: 0.14
Human Intestinal Absorption (HIA): 0.308 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.984

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.07 Plasma Protein Binding (PPB): 92.16%
Volume Distribution (VD): 0.995 Fu: 5.06%

ADMET: Metabolism

CYP1A2-inhibitor: 0.299 CYP1A2-substrate: 0.046
CYP2C19-inhibitor: 0.091 CYP2C19-substrate: 0.062
CYP2C9-inhibitor: 0.027 CYP2C9-substrate: 0.477
CYP2D6-inhibitor: 0.719 CYP2D6-substrate: 0.601
CYP3A4-inhibitor: 0.075 CYP3A4-substrate: 0.057

ADMET: Excretion

Clearance (CL): 2.822 Half-life (T1/2): 0.633

ADMET: Toxicity

hERG Blockers: 0.191 Human Hepatotoxicity (H-HT): 0.061
Drug-inuced Liver Injury (DILI): 0.555 AMES Toxicity: 0.228
Rat Oral Acute Toxicity: 0.085 Maximum Recommended Daily Dose: 0.008
Skin Sensitization: 0.612 Carcinogencity: 0.665
Eye Corrosion: 0.003 Eye Irritation: 0.158
Respiratory Toxicity: 0.028
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004475 0.771 D08DFX 0.413
ENC001576 0.551 D01TNW 0.409
ENC004073 0.496 D06BQU 0.404
ENC001532 0.482 D06ALD 0.398
ENC004734 0.475 D0R2OA 0.398
ENC003703 0.446 D0TC7C 0.353
ENC004797 0.441 D0I9HF 0.320
ENC001572 0.431 D0AZ8C 0.300
ENC001550 0.429 D0H3KI 0.292
ENC001771 0.416 D09LBS 0.283
*Note: the compound similarity was calculated by RDKIT.