NPs Basic Information

Name
Alpha-Hederin
Molecular Formula C41H66O12
IUPAC Name*
(4aS,6aR,6aS,6bR,8aR,9R,10S,12aR)-10-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
SMILES
C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@H](CO[C@H]2O[C@H]3CC[C@]4([C@H]([C@]3(C)CO)CC[C@@]5([C@@H]4CC=C6[C@]5(CC[C@@]7(C6CC(CC7)(C)C)C(=O)O)C)C)C)O)O)O)O)O
InChI
InChI=1S/C41H66O12/c1-21-28(44)30(46)31(47)33(51-21)53-32-29(45)24(43)19-50-34(32)52-27-11-12-37(4)25(38(27,5)20-42)10-13-40(7)26(37)9-8-22-23-18-36(2,3)14-16-41(23,35(48)49)17-15-39(22,40)6/h8,21,23-34,42-47H,9-20H2,1-7H3,(H,48,49)/t21-,23?,24-,25+,26+,27-,28-,29-,30+,31+,32+,33-,34-,37-,38-,39+,40+,41-/m0/s1
InChIKey
KEOITPILCOILGM-HYJPIGBRSA-N
Synonyms
alpha-Hederin; Sapindoside A; (4aS,6aR,6aS,6bR,8aR,9R,10S,12aR,14bS)-10-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyl-tetrahydropyran-2-yl]oxy-tetrahydropyran-2-yl]oxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
CAS NA
PubChem CID 118701055
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Triterpenoids
          • Direct Parent: Triterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 751.0 ALogp: 3.6
HBD: 7 HBA: 12
Rotatable Bonds: 6 Lipinski's rule of five: Rejected
Polar Surface Area: 196.0 Aromatic Rings: 7
Heavy Atoms: 53 QED Weighted: 0.151

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.552 MDCK Permeability: 0.00000818
Pgp-inhibitor: 0.92 Pgp-substrate: 0.004
Human Intestinal Absorption (HIA): 0.521 20% Bioavailability (F20%): 0.027
30% Bioavailability (F30%): 0.809

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.025 Plasma Protein Binding (PPB): 89.78%
Volume Distribution (VD): 0.443 Fu: 8.44%

ADMET: Metabolism

CYP1A2-inhibitor: 0.001 CYP1A2-substrate: 0.874
CYP2C19-inhibitor: 0.002 CYP2C19-substrate: 0.597
CYP2C9-inhibitor: 0.009 CYP2C9-substrate: 0.028
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.076
CYP3A4-inhibitor: 0.108 CYP3A4-substrate: 0.045

ADMET: Excretion

Clearance (CL): 0.852 Half-life (T1/2): 0.528

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.248
Drug-inuced Liver Injury (DILI): 0.013 AMES Toxicity: 0.076
Rat Oral Acute Toxicity: 0.066 Maximum Recommended Daily Dose: 0.489
Skin Sensitization: 0.042 Carcinogencity: 0.038
Eye Corrosion: 0.003 Eye Irritation: 0.01
Respiratory Toxicity: 0.963
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004077 0.606 D03MTN 0.510
ENC002265 0.436 D0P2IT 0.498
ENC001939 0.424 D07QQD 0.447
ENC005544 0.422 D04RYU 0.389
ENC000865 0.401 D0AR3J 0.369
ENC001938 0.397 D07ORO 0.361
ENC002180 0.370 D04MRG 0.350
ENC002246 0.368 D0M2QH 0.340
ENC001894 0.366 D09HTS 0.332
ENC001394 0.356 D0P6IK 0.324
*Note: the compound similarity was calculated by RDKIT.