NPs Basic Information

Name
N-[(2R,3R,4R,5S,6R)-2-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide
Molecular Formula C8H16N2O5
IUPAC Name*
N-[(2R,3R,4R,5S,6R)-2-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide
SMILES
CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1N)CO)O)O
InChI
InChI=1S/C8H16N2O5/c1-3(12)10-5-7(14)6(13)4(2-11)15-8(5)9/h4-8,11,13-14H,2,9H2,1H3,(H,10,12)/t4-,5-,6-,7-,8-/m1/s1
InChIKey
MCGXOCXFFNKASF-FMDGEEDCSA-N
Synonyms
18615-50-4; 2-acetamido-2-deoxy-beta-D-glucopyranosylamine; 4229-38-3; N-Acetyl-beta-D-glucosaminylamine; 2-Acetamido-2-deoxy-beta-D-glucosylamine; 2-Acetamido-2-deoxy-b-D-glucosylamine; N-Acetyl-b-glucosaminylamine; N-acetyl-beta-glucosaminylamine; 2-Acetamido-2-deoxy-b-D-glucopyranosyl amine; N-[(2R,3R,4R,5S,6R)-2-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide; 2-Acetamido-1-amino-1,2-dideoxy-beta-D-glucopyranose; 114910-04-2; 112339-01-2; 112339-04-5; N-((2R,3R,4R,5S,6R)-2-AMINO-4,5-DIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-3-YL)ACETAMIDE; .beta.-D-ribo-Hexopyranose, 1,6-anhydro-3-deoxy-2-S-methyl-4-O-(phenylmethyl)-2-thio-; .beta.-D-erythro-Hexopyranos-2-ulose, 1,6-anhydro-3-deoxy-4-O-(phenylmethyl)-, dimethyl acetal; 1-Naphthalenediazonium, 4-[[4-[(4-nitro-2-sulfophenyl) amino]phenyl]azo]-6-sulfo-, chloride, reactio; N-acetyl-b-D-glucosaminylamine; SCHEMBL6036803; CHEBI:15947; DTXSID101036106; MFCD00057751; N-acetyl-beta-delta-glucosaminylamine; ZINC53193391; CS-0452428; 2-Acetamido-2-deoxy-|A-D-glucopyranosylamine; C01239; 229A383; W-202730; Q27098314; N-[2-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]ethanamide; WURCS=2.0/1,1,0/[a2122h-1b_1-5_1*N_2*NCC/3=O]/1/
CAS 114910-04-2
PubChem CID 439454
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Hexoses

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 220.22 ALogp: -2.0
HBD: 5 HBA: 6
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 125.0 Aromatic Rings: 1
Heavy Atoms: 15 QED Weighted: 0.347

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.392 MDCK Permeability: 0.00011788
Pgp-inhibitor: 0.001 Pgp-substrate: 0.796
Human Intestinal Absorption (HIA): 0.862 20% Bioavailability (F20%): 0.27
30% Bioavailability (F30%): 0.932

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.161 Plasma Protein Binding (PPB): 12.25%
Volume Distribution (VD): 0.385 Fu: 89.36%

ADMET: Metabolism

CYP1A2-inhibitor: 0.017 CYP1A2-substrate: 0.022
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.065
CYP2C9-inhibitor: 0.009 CYP2C9-substrate: 0.032
CYP2D6-inhibitor: 0.018 CYP2D6-substrate: 0.103
CYP3A4-inhibitor: 0.007 CYP3A4-substrate: 0.056

ADMET: Excretion

Clearance (CL): 1.885 Half-life (T1/2): 0.84

ADMET: Toxicity

hERG Blockers: 0.045 Human Hepatotoxicity (H-HT): 0.244
Drug-inuced Liver Injury (DILI): 0.038 AMES Toxicity: 0.462
Rat Oral Acute Toxicity: 0.004 Maximum Recommended Daily Dose: 0.004
Skin Sensitization: 0.097 Carcinogencity: 0.015
Eye Corrosion: 0.003 Eye Irritation: 0.033
Respiratory Toxicity: 0.027
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000661 0.429 D05ZYM 0.733
ENC001062 0.407 D0I8RR 0.509
ENC003068 0.407 D07NSU 0.489
ENC003055 0.393 D0H2RI 0.429
ENC004291 0.377 D0H3KI 0.429
ENC005771 0.367 D02HYK 0.403
ENC000851 0.367 D0S7DV 0.393
ENC005772 0.357 D0H3WI 0.393
ENC003177 0.338 D0G5AG 0.381
ENC000126 0.328 D0Z4EI 0.360
*Note: the compound similarity was calculated by RDKIT.