NPs Basic Information

Name
3-(3,4-Dihydroxyphenyl)-4,6,8-trihydroxy-1H-isochromen-1-one-6-O-β-d-glucopyranoside
Molecular Formula C21H20O12
IUPAC Name*
3-(3,4-dihydroxyphenyl)-4,8-dihydroxy-6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyisochromen-1-one
SMILES
O=c1oc(-c2ccc(O)c(O)c2)c(O)c2cc(OC3OC(CO)C(O)C(O)C3O)cc(O)c12
InChI
InChI=1S/C21H20O12/c22-6-13-16(27)17(28)18(29)21(32-13)31-8-4-9-14(12(25)5-8)20(30)33-19(15(9)26)7-1-2-10(23)11(24)3-7/h1-5,13,16-18,21-29H,6H2
InChIKey
DCVJFIZWKZXWRM-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 464.38 ALogp: -0.5
HBD: 8 HBA: 12
Rotatable Bonds: 4 Lipinski's rule of five: Rejected
Polar Surface Area: 210.5 Aromatic Rings: 4
Heavy Atoms: 33 QED Weighted: 0.238

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -6.316 MDCK Permeability: 0.00001800
Pgp-inhibitor: 0.003 Pgp-substrate: 0.884
Human Intestinal Absorption (HIA): 0.824 20% Bioavailability (F20%): 0.391
30% Bioavailability (F30%): 0.999

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.022 Plasma Protein Binding (PPB): 90.24%
Volume Distribution (VD): 0.806 Fu: 11.57%

ADMET: Metabolism

CYP1A2-inhibitor: 0.092 CYP1A2-substrate: 0.029
CYP2C19-inhibitor: 0.013 CYP2C19-substrate: 0.047
CYP2C9-inhibitor: 0.012 CYP2C9-substrate: 0.159
CYP2D6-inhibitor: 0.024 CYP2D6-substrate: 0.168
CYP3A4-inhibitor: 0.039 CYP3A4-substrate: 0.008

ADMET: Excretion

Clearance (CL): 5.107 Half-life (T1/2): 0.771

ADMET: Toxicity

hERG Blockers: 0.124 Human Hepatotoxicity (H-HT): 0.215
Drug-inuced Liver Injury (DILI): 0.986 AMES Toxicity: 0.766
Rat Oral Acute Toxicity: 0.041 Maximum Recommended Daily Dose: 0.015
Skin Sensitization: 0.26 Carcinogencity: 0.167
Eye Corrosion: 0.003 Eye Irritation: 0.031
Respiratory Toxicity: 0.031
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001572 0.717 D0K8KX 0.471
ENC001575 0.624 D0TC7C 0.418
ENC004475 0.571 D0I9HF 0.405
ENC001546 0.533 D04AIT 0.396
ENC001532 0.509 D06BQU 0.381
ENC004797 0.500 D0AZ8C 0.324
ENC002201 0.500 D0Z2LG 0.313
ENC004476 0.475 D09LBS 0.313
ENC001529 0.471 D01TNW 0.313
ENC002582 0.434 D08DFX 0.311
*Note: the compound similarity was calculated by RDKIT.