NPs Basic Information

Name
7-O-α-d-ribosyl-2,3-dihydro-5-hydroxy-2-methyl-chromen-4-one
Molecular Formula C15H16O8
IUPAC Name*
7-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-5-hydroxy-2-methylchromen-4-one
SMILES
Cc1cc(=O)c2c(O)cc(OC3OC(CO)C(O)C3O)cc2o1
InChI
InChI=1S/C15H16O8/c1-6-2-8(17)12-9(18)3-7(4-10(12)21-6)22-15-14(20)13(19)11(5-16)23-15/h2-4,11,13-16,18-20H,5H2,1H3/t11-,13-,14-,15+/m1/s1
InChIKey
NAXJEHSVBWAFEV-NGFQHRJXSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 324.29 ALogp: -0.4
HBD: 4 HBA: 8
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 129.6 Aromatic Rings: 3
Heavy Atoms: 23 QED Weighted: 0.623

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.581 MDCK Permeability: 0.00013984
Pgp-inhibitor: 0.001 Pgp-substrate: 0.36
Human Intestinal Absorption (HIA): 0.541 20% Bioavailability (F20%): 0.018
30% Bioavailability (F30%): 0.975

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.389 Plasma Protein Binding (PPB): 71.97%
Volume Distribution (VD): 0.984 Fu: 33.98%

ADMET: Metabolism

CYP1A2-inhibitor: 0.074 CYP1A2-substrate: 0.184
CYP2C19-inhibitor: 0.018 CYP2C19-substrate: 0.409
CYP2C9-inhibitor: 0.004 CYP2C9-substrate: 0.461
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.3
CYP3A4-inhibitor: 0.01 CYP3A4-substrate: 0.064

ADMET: Excretion

Clearance (CL): 3.234 Half-life (T1/2): 0.538

ADMET: Toxicity

hERG Blockers: 0.013 Human Hepatotoxicity (H-HT): 0.07
Drug-inuced Liver Injury (DILI): 0.792 AMES Toxicity: 0.624
Rat Oral Acute Toxicity: 0.038 Maximum Recommended Daily Dose: 0.04
Skin Sensitization: 0.118 Carcinogencity: 0.845
Eye Corrosion: 0.003 Eye Irritation: 0.046
Respiratory Toxicity: 0.064
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003752 0.644 D0TC7C 0.377
ENC004909 0.575 D06BQU 0.372
ENC004798 0.575 D0I9HF 0.331
ENC004475 0.520 D04AIT 0.315
ENC003813 0.510 D07XSN 0.313
ENC004734 0.500 D0Y7DP 0.313
ENC001625 0.471 D0G5AG 0.306
ENC005772 0.451 D01TNW 0.306
ENC002201 0.445 D09FAZ 0.298
ENC003365 0.444 D05ZYM 0.291
*Note: the compound similarity was calculated by RDKIT.