NPs Basic Information

Name
Vitexin
Molecular Formula C21H20O10
IUPAC Name*
5,7-dihydroxy-2-(4-hydroxyphenyl)-8-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]chromen-4-one
SMILES
C1=CC(=CC=C1C2=CC(=O)C3=C(O2)C(=C(C=C3O)O)[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O
InChI
InChI=1S/C21H20O10/c22-7-14-17(27)18(28)19(29)21(31-14)16-11(25)5-10(24)15-12(26)6-13(30-20(15)16)8-1-3-9(23)4-2-8/h1-6,14,17-19,21-25,27-29H,7H2/t14-,17-,18+,19-,21+/m1/s1
InChIKey
SGEWCQFRYRRZDC-VPRICQMDSA-N
Synonyms
Vitexin; 3681-93-4; Apigenin 8-C-glucoside; Vitxein; 8-beta-D-Glucopyranosyl-apigenin; 9VP70K75OK; 5,7-dihydroxy-2-(4-hydroxyphenyl)-8-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]chromen-4-one; CHEBI:16954; MFCD00017456; 4H-1-Benzopyran-4-one, 5,7-dihydroxy-8-beta-D-glucopyranosyl-2-(4-hydroxyphenyl)-; Flavone, 8-D-glucosyl-4',5,7-trihydroxy-; (1S)-1,5-anhydro-1-[5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-8-yl]-D-glucitol; 4H-1-Benzopyran-4-one, 8-.beta.-D-glucopyranosyl-5,7-dihydroxy-2-(4-hydroxyphenyl)-; 5,7-dihydroxy-2-(4-hydroxyphenyl)-8-((2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)-4H-chromen-4-one; 8-beta-D-Glucopyranosyl-5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one; EINECS 222-963-8; UNII-9VP70K75OK; Vitexin,(S); ORIENTOSIDE; VITEXINA; VITEXINE; VITEXIN [INCI]; VITEXIN [USP-RS]; VITEXIN [WHO-DD]; Vitexin, analytical standard; SCHEMBL25277; CHEMBL487417; DTXSID90190287; Apigenin 8-C-.beta.-D-glucoside; ACT02625; HY-N0013; ZINC4245684; BDBM50362886; HB4123; s9192; AKOS025311479; AC-6086; CCG-208516; 4H-1-Benzopyran-4-one, 8-beta-D-glucopyranosyl-5,7-dihydroxy-2-(4-hydroxyphenyl)-; NCGC00163642-01; Vitexin 100 microg/mL in Acetone:Water; 5,7-dihydroxy-2-(4-hydroxyphenyl)-8-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]chromen-4-one; AS-55909; (hydroxymethyl)tetrahydro-2H-pyran-2-yl)-; CS-0007090; APIGENIN-8-C-.BETA.-D-GLUCOPYRANOSIDE; C01460; 681V934; Q259075; Vitexin, primary pharmaceutical reference standard; Q-100437; 8-((2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-; 5,7,4'-Trihydroxyflavone 8-C-.beta.-D-glucopyranoside; Vitexin, United States Pharmacopeia (USP) Reference Standard; FLAVONE, 8-.BETA.-D-GLUCOPYRANOSYL-4',5,7-TRIHYDROXY-; 4H-1-Benzopyran-4-one, 5,7-dihydroxy-8-.beta.-D-glucopyranosyl-2-(4-hydroxyphenyl)-
CAS 3681-93-4
PubChem CID 5280441
ChEMBL ID CHEMBL487417
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Flavonoids
        • Subclass: Flavonoid glycosides
          • Direct Parent: Flavonoid 8-C-glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 432.4 ALogp: 0.2
HBD: 7 HBA: 10
Rotatable Bonds: 3 Lipinski's rule of five: Rejected
Polar Surface Area: 177.0 Aromatic Rings: 4
Heavy Atoms: 31 QED Weighted: 0.308

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -6.222 MDCK Permeability: 0.00000547
Pgp-inhibitor: 0.005 Pgp-substrate: 0.991
Human Intestinal Absorption (HIA): 0.841 20% Bioavailability (F20%): 0.934
30% Bioavailability (F30%): 1

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.017 Plasma Protein Binding (PPB): 89.60%
Volume Distribution (VD): 0.903 Fu: 11.41%

ADMET: Metabolism

CYP1A2-inhibitor: 0.211 CYP1A2-substrate: 0.039
CYP2C19-inhibitor: 0.023 CYP2C19-substrate: 0.053
CYP2C9-inhibitor: 0.067 CYP2C9-substrate: 0.526
CYP2D6-inhibitor: 0.094 CYP2D6-substrate: 0.167
CYP3A4-inhibitor: 0.065 CYP3A4-substrate: 0.02

ADMET: Excretion

Clearance (CL): 4.091 Half-life (T1/2): 0.765

ADMET: Toxicity

hERG Blockers: 0.11 Human Hepatotoxicity (H-HT): 0.175
Drug-inuced Liver Injury (DILI): 0.978 AMES Toxicity: 0.797
Rat Oral Acute Toxicity: 0.076 Maximum Recommended Daily Dose: 0.008
Skin Sensitization: 0.67 Carcinogencity: 0.072
Eye Corrosion: 0.003 Eye Irritation: 0.134
Respiratory Toxicity: 0.085
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001575 0.792 D04AIT 0.416
ENC004475 0.569 D08DFX 0.398
ENC001572 0.513 D0TC7C 0.377
ENC004734 0.509 D01TNW 0.370
ENC002201 0.508 D06ALD 0.352
ENC001533 0.484 D0AZ8C 0.346
ENC004476 0.482 D0K8KX 0.343
ENC001573 0.460 D06BQU 0.321
ENC001534 0.416 D0I9HF 0.310
ENC001548 0.416 D06GCK 0.294
*Note: the compound similarity was calculated by RDKIT.