NPs Basic Information

Name
Cyclo(Pro-Trp)
Molecular Formula C16H17N3O2
IUPAC Name*
3-(1H-indol-2-ylmethyl)-2,3,6,7,8,8a-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione
SMILES
C1CC2C(=O)NC(C(=O)N2C1)CC3=CC4=CC=CC=C4N3
InChI
InChI=1S/C16H17N3O2/c20-15-14-6-3-7-19(14)16(21)13(18-15)9-11-8-10-4-1-2-5-12(10)17-11/h1-2,4-5,8,13-14,17H,3,6-7,9H2,(H,18,20)
InChIKey
OAUYQLJZHZRZSL-UHFFFAOYSA-N
Synonyms
Cyclo(Pro-Trp); 67889-75-2
CAS NA
PubChem CID 102004914
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 283.32 ALogp: 1.5
HBD: 2 HBA: 2
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 65.2 Aromatic Rings: 4
Heavy Atoms: 21 QED Weighted: 0.88

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.886 MDCK Permeability: 0.00001240
Pgp-inhibitor: 0.001 Pgp-substrate: 0.005
Human Intestinal Absorption (HIA): 0.011 20% Bioavailability (F20%): 0.049
30% Bioavailability (F30%): 0.712

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.566 Plasma Protein Binding (PPB): 56.05%
Volume Distribution (VD): 0.77 Fu: 34.20%

ADMET: Metabolism

CYP1A2-inhibitor: 0.069 CYP1A2-substrate: 0.312
CYP2C19-inhibitor: 0.49 CYP2C19-substrate: 0.083
CYP2C9-inhibitor: 0.237 CYP2C9-substrate: 0.867
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.661
CYP3A4-inhibitor: 0.572 CYP3A4-substrate: 0.205

ADMET: Excretion

Clearance (CL): 5.141 Half-life (T1/2): 0.785

ADMET: Toxicity

hERG Blockers: 0.024 Human Hepatotoxicity (H-HT): 0.739
Drug-inuced Liver Injury (DILI): 0.289 AMES Toxicity: 0.035
Rat Oral Acute Toxicity: 0.808 Maximum Recommended Daily Dose: 0.747
Skin Sensitization: 0.264 Carcinogencity: 0.226
Eye Corrosion: 0.003 Eye Irritation: 0.013
Respiratory Toxicity: 0.414
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000975 0.694 D0U7GK 0.310
ENC004610 0.694 D04ACW 0.310
ENC005971 0.662 D05EPM 0.304
ENC000825 0.662 D02DMQ 0.299
ENC001087 0.662 D0AV3G 0.298
ENC005484 0.662 D0Q5NX 0.295
ENC000981 0.595 D05MQK 0.295
ENC004933 0.595 D09ZIO 0.294
ENC001926 0.588 D08VRO 0.286
ENC005408 0.554 D06BYV 0.282
*Note: the compound similarity was calculated by RDKIT.