NPs Basic Information

Name
Tubingensin A
Molecular Formula C28H35NO
IUPAC Name*
(16S,17R,20S,21R)-16,17-dimethyl-21-(4-methylpent-3-enyl)-10-azapentacyclo[11.8.0.03,11.04,9.016,21]henicosa-1,3(11),4,6,8,12-hexaen-20-ol
SMILES
C[C@@H]1CC[C@@H]([C@@]2([C@]1(CCC3=CC4=C(C=C32)C5=CC=CC=C5N4)C)CCC=C(C)C)O
InChI
InChI=1S/C28H35NO/c1-18(2)8-7-14-28-23-17-22-21-9-5-6-10-24(21)29-25(22)16-20(23)13-15-27(28,4)19(3)11-12-26(28)30/h5-6,8-10,16-17,19,26,29-30H,7,11-15H2,1-4H3/t19-,26+,27+,28-/m1/s1
InChIKey
BWCQRIGHZTXFEA-AIERRPMVSA-N
Synonyms
Tubingensin A; (1S,4R,4aS,13bR)-4,4a-dimethyl-13b-(4-methylpent-3-en-1-yl)-2,3,4,4a,5,6,8,13b-octahydro-1H-naphtho[2,1-b]carbazol-1-ol
CAS NA
PubChem CID 14413056
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Phenanthrenes and derivat
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Phenanthrenes and derivat

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 401.6 ALogp: 7.7
HBD: 2 HBA: 1
Rotatable Bonds: 3 Lipinski's rule of five: Rejected
Polar Surface Area: 36.0 Aromatic Rings: 5
Heavy Atoms: 30 QED Weighted: 0.456

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.998 MDCK Permeability: 0.00001260
Pgp-inhibitor: 0.997 Pgp-substrate: 0.045
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.983
30% Bioavailability (F30%): 0.986

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.081 Plasma Protein Binding (PPB): 96.76%
Volume Distribution (VD): 6.112 Fu: 3.58%

ADMET: Metabolism

CYP1A2-inhibitor: 0.857 CYP1A2-substrate: 0.386
CYP2C19-inhibitor: 0.44 CYP2C19-substrate: 0.556
CYP2C9-inhibitor: 0.539 CYP2C9-substrate: 0.902
CYP2D6-inhibitor: 0.673 CYP2D6-substrate: 0.889
CYP3A4-inhibitor: 0.712 CYP3A4-substrate: 0.218

ADMET: Excretion

Clearance (CL): 9.784 Half-life (T1/2): 0.036

ADMET: Toxicity

hERG Blockers: 0.885 Human Hepatotoxicity (H-HT): 0.671
Drug-inuced Liver Injury (DILI): 0.048 AMES Toxicity: 0.391
Rat Oral Acute Toxicity: 0.893 Maximum Recommended Daily Dose: 0.983
Skin Sensitization: 0.955 Carcinogencity: 0.354
Eye Corrosion: 0.004 Eye Irritation: 0.534
Respiratory Toxicity: 0.949
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001931 0.470 D0W6DG 0.300
ENC002079 0.444 D0IT2X 0.278
ENC003874 0.405 D03VFL 0.273
ENC002423 0.385 D01JGV 0.270
ENC005121 0.379 D0U7GP 0.270
ENC002422 0.374 D0H4JM 0.270
ENC003299 0.359 D08VRO 0.263
ENC005120 0.346 D06CWH 0.252
ENC003932 0.340 D0T7ZQ 0.250
ENC005883 0.339 D0NS6H 0.248
*Note: the compound similarity was calculated by RDKIT.