NPs Basic Information

Name
Glochidacuminoside A
Molecular Formula C13H16O8
IUPAC Name*
2-[2-(3,4,5,6-tetrahydroxyoxan-2-yl)oxyphenyl]aceticacid
SMILES
O=C(O)Cc1ccccc1OC1OC(O)C(O)C(O)C1O
InChI
InChI=1S/C13H16O8/c14-8(15)5-6-3-1-2-4-7(6)20-13-11(18)9(16)10(17)12(19)21-13/h1-4,9-13,16-19H,5H2,(H,14,15)/t9-,10?,11+,12+,13?/m0/s1
InChIKey
QPWCBRANYNKMAH-FDVIIKHLSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 300.26 ALogp: -1.6
HBD: 5 HBA: 7
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 136.7 Aromatic Rings: 2
Heavy Atoms: 21 QED Weighted: 0.477

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -6.202 MDCK Permeability: 0.00035977
Pgp-inhibitor: 0 Pgp-substrate: 0.085
Human Intestinal Absorption (HIA): 0.79 20% Bioavailability (F20%): 0.007
30% Bioavailability (F30%): 0.974

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.614 Plasma Protein Binding (PPB): 60.96%
Volume Distribution (VD): 0.236 Fu: 48.64%

ADMET: Metabolism

CYP1A2-inhibitor: 0.016 CYP1A2-substrate: 0.029
CYP2C19-inhibitor: 0.018 CYP2C19-substrate: 0.074
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.796
CYP2D6-inhibitor: 0.015 CYP2D6-substrate: 0.152
CYP3A4-inhibitor: 0.005 CYP3A4-substrate: 0.016

ADMET: Excretion

Clearance (CL): 1.58 Half-life (T1/2): 0.831

ADMET: Toxicity

hERG Blockers: 0.018 Human Hepatotoxicity (H-HT): 0.069
Drug-inuced Liver Injury (DILI): 0.931 AMES Toxicity: 0.234
Rat Oral Acute Toxicity: 0.156 Maximum Recommended Daily Dose: 0.002
Skin Sensitization: 0.102 Carcinogencity: 0.088
Eye Corrosion: 0.003 Eye Irritation: 0.01
Respiratory Toxicity: 0.02
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005608 0.413 D06BQU 0.623
ENC000409 0.403 D0H3KI 0.375
ENC003055 0.391 D0N3UL 0.306
ENC001333 0.381 D02HYK 0.286
ENC005772 0.378 D05ZYM 0.280
ENC004773 0.375 D0TG1H 0.279
ENC000661 0.375 D0GY5Z 0.278
ENC004291 0.361 D01TNW 0.274
ENC005615 0.360 D07HBX 0.273
ENC001625 0.337 D06ALD 0.261
*Note: the compound similarity was calculated by RDKIT.