NPs Basic Information

Name
3-hydroxy-3-methyl-δ-lactone
Molecular Formula C6H10O3
IUPAC Name*
4-hydroxy-4-methyloxan-2-one
SMILES
CC1(O)CCOC(=O)C1
InChI
InChI=1S/C6H10O3/c1-6(8)2-3-9-5(7)4-6/h8H,2-4H2,1H3
InChIKey
JYVXNLLUYHCIIH-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Delta valerolactones
          • Direct Parent: Delta valerolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 130.14 ALogp: 0.1
HBD: 1 HBA: 3
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 1
Heavy Atoms: 9 QED Weighted: 0.485

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.572 MDCK Permeability: 0.00004360
Pgp-inhibitor: 0.004 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.011
30% Bioavailability (F30%): 0.433

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.953 Plasma Protein Binding (PPB): 13.34%
Volume Distribution (VD): 0.518 Fu: 80.79%

ADMET: Metabolism

CYP1A2-inhibitor: 0.055 CYP1A2-substrate: 0.666
CYP2C19-inhibitor: 0.053 CYP2C19-substrate: 0.767
CYP2C9-inhibitor: 0.011 CYP2C9-substrate: 0.184
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.162
CYP3A4-inhibitor: 0.023 CYP3A4-substrate: 0.273

ADMET: Excretion

Clearance (CL): 8.164 Half-life (T1/2): 0.735

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.043
Drug-inuced Liver Injury (DILI): 0.099 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.007 Maximum Recommended Daily Dose: 0.049
Skin Sensitization: 0.212 Carcinogencity: 0.058
Eye Corrosion: 0.93 Eye Irritation: 0.959
Respiratory Toxicity: 0.027
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001789 1.000 D0Z8AA 0.333
ENC000184 0.367 D0H1QY 0.233
ENC003480 0.283 D07QKN 0.217
ENC005088 0.280 D0U3GL 0.214
ENC003670 0.273 D0Q4XQ 0.190
ENC000051 0.270 D0G6AB 0.178
ENC002170 0.268 D0A2AJ 0.175
ENC001341 0.262 D0Q6NZ 0.169
ENC004767 0.255 D0U4VT 0.167
ENC001047 0.250 D04VIS 0.165
*Note: the compound similarity was calculated by RDKIT.