NPs Basic Information

Name
2-[(E)-2-amino-1,3-dihydroxyoctadec-4-enyl]-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
Molecular Formula C24H47NO8
IUPAC Name*
2-[(E)-2-amino-1,3-dihydroxyoctadec-4-enyl]-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
SMILES
CCCCCCCCCCCCC/C=C/C(C(C(C1(C(C(C(C(O1)CO)O)O)O)O)O)N)O
InChI
InChI=1S/C24H47NO8/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-17(27)19(25)22(30)24(32)23(31)21(29)20(28)18(16-26)33-24/h14-15,17-23,26-32H,2-13,16,25H2,1H3/b15-14+
InChIKey
DHFHTNWDXYUZBB-CCEZHUSRSA-N
Synonyms
hexosylsphingosine
CAS NA
PubChem CID 156963440
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Sphingolipids
        • Subclass: Glycosphingolipids
          • Direct Parent: Glycosphingolipids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 477.6 ALogp: 3.5
HBD: 8 HBA: 9
Rotatable Bonds: 17 Lipinski's rule of five: Rejected
Polar Surface Area: 177.0 Aromatic Rings: 1
Heavy Atoms: 33 QED Weighted: 0.111

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.24 MDCK Permeability: 0.00010158
Pgp-inhibitor: 0.097 Pgp-substrate: 0.222
Human Intestinal Absorption (HIA): 0.993 20% Bioavailability (F20%): 0.971
30% Bioavailability (F30%): 0.977

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.177 Plasma Protein Binding (PPB): 95.34%
Volume Distribution (VD): 0.574 Fu: 4.01%

ADMET: Metabolism

CYP1A2-inhibitor: 0.02 CYP1A2-substrate: 0.045
CYP2C19-inhibitor: 0.008 CYP2C19-substrate: 0.058
CYP2C9-inhibitor: 0.002 CYP2C9-substrate: 0.839
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.164
CYP3A4-inhibitor: 0.009 CYP3A4-substrate: 0.016

ADMET: Excretion

Clearance (CL): 1.38 Half-life (T1/2): 0.189

ADMET: Toxicity

hERG Blockers: 0.111 Human Hepatotoxicity (H-HT): 0.175
Drug-inuced Liver Injury (DILI): 0.018 AMES Toxicity: 0.086
Rat Oral Acute Toxicity: 0.152 Maximum Recommended Daily Dose: 0.01
Skin Sensitization: 0.176 Carcinogencity: 0.01
Eye Corrosion: 0.003 Eye Irritation: 0.005
Respiratory Toxicity: 0.81
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001528 0.568 D0O1PH 0.393
ENC005852 0.547 D00STJ 0.351
ENC002672 0.455 D07ILQ 0.339
ENC003750 0.431 D0Z5SM 0.333
ENC005817 0.431 D00AOJ 0.319
ENC002194 0.431 D04RGA 0.307
ENC002909 0.431 D05ATI 0.305
ENC001613 0.419 D09SRR 0.299
ENC000789 0.419 D0T9TJ 0.297
ENC001590 0.413 D0I4DQ 0.282
*Note: the compound similarity was calculated by RDKIT.