NPs Basic Information

Name
Spirobrocazine B
Molecular Formula C19H16N2O4S
IUPAC Name*
(3S,10aR)-6-hydroxy-10a-methylsulfanylspiro[2,10-dihydropyrazino[1,2-a]indole-3,2'-3H-1-benzofuran]-1,4-dione
SMILES
CS[C@@]12CC3=C(N1C(=O)[C@@]4(CC5=CC=CC=C5O4)NC2=O)C(=CC=C3)O
InChI
InChI=1S/C19H16N2O4S/c1-26-19-10-12-6-4-7-13(22)15(12)21(19)17(24)18(20-16(19)23)9-11-5-2-3-8-14(11)25-18/h2-8,22H,9-10H2,1H3,(H,20,23)/t18-,19+/m0/s1
InChIKey
QEJFLMXVVNWJQD-RBUKOAKNSA-N
Synonyms
Spirobrocazine B; J3.558.893K
CAS NA
PubChem CID 132600335
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Indoles and derivatives
        • Subclass: Indolecarboxylic acids an
          • Direct Parent: Indolecarboxylic acids an

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 368.4 ALogp: 2.4
HBD: 2 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 104.0 Aromatic Rings: 5
Heavy Atoms: 26 QED Weighted: 0.808

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.134 MDCK Permeability: 0.00002740
Pgp-inhibitor: 0.008 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.029

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.969 Plasma Protein Binding (PPB): 92.38%
Volume Distribution (VD): 0.621 Fu: 7.13%

ADMET: Metabolism

CYP1A2-inhibitor: 0.264 CYP1A2-substrate: 0.375
CYP2C19-inhibitor: 0.935 CYP2C19-substrate: 0.913
CYP2C9-inhibitor: 0.908 CYP2C9-substrate: 0.913
CYP2D6-inhibitor: 0.224 CYP2D6-substrate: 0.232
CYP3A4-inhibitor: 0.9 CYP3A4-substrate: 0.955

ADMET: Excretion

Clearance (CL): 13.858 Half-life (T1/2): 0.63

ADMET: Toxicity

hERG Blockers: 0.001 Human Hepatotoxicity (H-HT): 0.193
Drug-inuced Liver Injury (DILI): 0.979 AMES Toxicity: 0.053
Rat Oral Acute Toxicity: 0.754 Maximum Recommended Daily Dose: 0.033
Skin Sensitization: 0.435 Carcinogencity: 0.833
Eye Corrosion: 0.003 Eye Irritation: 0.007
Respiratory Toxicity: 0.025
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003438 0.574 D0QL3P 0.280
ENC003440 0.505 D08EOD 0.278
ENC005510 0.432 D0E4DW 0.277
ENC003035 0.339 D08CCE 0.276
ENC003111 0.337 D0DV3O 0.275
ENC003390 0.323 D0H6QU 0.272
ENC001956 0.321 D07RGW 0.269
ENC004650 0.320 D08UMH 0.268
ENC000171 0.318 D04WFD 0.267
ENC001985 0.315 D01UTL 0.267
*Note: the compound similarity was calculated by RDKIT.