NPs Basic Information

Name
Spirobrocazine A
Molecular Formula C19H18N2O4S
IUPAC Name*
(3S,5aS,6S,10aR)-6-hydroxy-10a-methylsulfanylspiro[2,5a,6,10-tetrahydropyrazino[1,2-a]indole-3,2'-3H-1-benzofuran]-1,4-dione
SMILES
CS[C@@]12CC3=CC=C[C@@H]([C@H]3N1C(=O)[C@@]4(CC5=CC=CC=C5O4)NC2=O)O
InChI
InChI=1S/C19H18N2O4S/c1-26-19-10-12-6-4-7-13(22)15(12)21(19)17(24)18(20-16(19)23)9-11-5-2-3-8-14(11)25-18/h2-8,13,15,22H,9-10H2,1H3,(H,20,23)/t13-,15-,18-,19+/m0/s1
InChIKey
QFWGYIKIPBTLBM-KNEBKQPDSA-N
Synonyms
Spirobrocazine A; J3.558.892B
CAS NA
PubChem CID 132600334
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 370.4 ALogp: 1.1
HBD: 2 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 104.0 Aromatic Rings: 5
Heavy Atoms: 26 QED Weighted: 0.781

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.176 MDCK Permeability: 0.00002440
Pgp-inhibitor: 0.076 Pgp-substrate: 0.008
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.042

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.983 Plasma Protein Binding (PPB): 87.21%
Volume Distribution (VD): 1.047 Fu: 12.99%

ADMET: Metabolism

CYP1A2-inhibitor: 0.02 CYP1A2-substrate: 0.098
CYP2C19-inhibitor: 0.296 CYP2C19-substrate: 0.865
CYP2C9-inhibitor: 0.747 CYP2C9-substrate: 0.118
CYP2D6-inhibitor: 0.02 CYP2D6-substrate: 0.112
CYP3A4-inhibitor: 0.72 CYP3A4-substrate: 0.955

ADMET: Excretion

Clearance (CL): 10.345 Half-life (T1/2): 0.702

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.205
Drug-inuced Liver Injury (DILI): 0.977 AMES Toxicity: 0.044
Rat Oral Acute Toxicity: 0.748 Maximum Recommended Daily Dose: 0.936
Skin Sensitization: 0.621 Carcinogencity: 0.91
Eye Corrosion: 0.003 Eye Irritation: 0.007
Respiratory Toxicity: 0.528
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003439 0.574 D08EOD 0.264
ENC003035 0.477 D00JRA 0.257
ENC000993 0.432 D07RGW 0.255
ENC006009 0.424 D08UMH 0.255
ENC005509 0.424 D0Z9NZ 0.253
ENC003440 0.388 D05MQK 0.244
ENC003617 0.380 D04QZD 0.243
ENC000134 0.347 D0QL3P 0.243
ENC003595 0.344 D06BYV 0.242
ENC004039 0.322 D08CCE 0.241
*Note: the compound similarity was calculated by RDKIT.