NPs Basic Information

Name
(3R)-3alpha,5beta,6alpha-Trimethyl-4beta-hydroxytetrahydro-2H-pyran-2-one
Molecular Formula C8H14O3
IUPAC Name*
(3R,4S,5R,6S)-4-hydroxy-3,5,6-trimethyloxan-2-one
SMILES
C[C@H]1[C@@H](OC(=O)[C@@H]([C@H]1O)C)C
InChI
InChI=1S/C8H14O3/c1-4-6(3)11-8(10)5(2)7(4)9/h4-7,9H,1-3H3/t4-,5+,6-,7-/m0/s1
InChIKey
WIPAYFJRYZXVMZ-VZFHVOOUSA-N
Synonyms
SCHEMBL14252568; (3R)-3alpha,5beta,6alpha-Trimethyl-4beta-hydroxytetrahydro-2H-pyran-2-one; (3R*,4S*,5R*,6S*)-tetrahydro-4-hydroxy-3,5,6-trimethyl-2-pyranone
CAS NA
PubChem CID 59682255
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Delta valerolactones
          • Direct Parent: Delta valerolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 158.19 ALogp: 1.0
HBD: 1 HBA: 3
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 1
Heavy Atoms: 11 QED Weighted: 0.534

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.491 MDCK Permeability: 0.00013171
Pgp-inhibitor: 0.001 Pgp-substrate: 0.012
Human Intestinal Absorption (HIA): 0.015 20% Bioavailability (F20%): 0.007
30% Bioavailability (F30%): 0.955

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.854 Plasma Protein Binding (PPB): 18.37%
Volume Distribution (VD): 0.87 Fu: 72.67%

ADMET: Metabolism

CYP1A2-inhibitor: 0.209 CYP1A2-substrate: 0.238
CYP2C19-inhibitor: 0.021 CYP2C19-substrate: 0.869
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0.115
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.243
CYP3A4-inhibitor: 0.019 CYP3A4-substrate: 0.305

ADMET: Excretion

Clearance (CL): 10.94 Half-life (T1/2): 0.758

ADMET: Toxicity

hERG Blockers: 0.026 Human Hepatotoxicity (H-HT): 0.429
Drug-inuced Liver Injury (DILI): 0.684 AMES Toxicity: 0.031
Rat Oral Acute Toxicity: 0.114 Maximum Recommended Daily Dose: 0.018
Skin Sensitization: 0.312 Carcinogencity: 0.163
Eye Corrosion: 0.85 Eye Irritation: 0.932
Respiratory Toxicity: 0.308
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004741 0.500 D0S3WH 0.254
ENC003160 0.489 D0K7LU 0.242
ENC004873 0.388 D03KXY 0.237
ENC004874 0.388 D01GYT 0.205
ENC004875 0.388 D04CSZ 0.188
ENC004876 0.388 D00HCQ 0.185
ENC004878 0.360 D0G6AB 0.184
ENC003515 0.348 D0N6FH 0.183
ENC003480 0.313 D02PCR 0.176
ENC004882 0.308 D05ZYM 0.175
*Note: the compound similarity was calculated by RDKIT.