NPs Basic Information

Name
Hydroxysydonic acid, (+/-)-
Molecular Formula C15H22O5
IUPAC Name*
4-(2,6-dihydroxy-6-methylheptan-2-yl)-3-hydroxybenzoic acid
SMILES
CC(C)(CCCC(C)(C1=C(C=C(C=C1)C(=O)O)O)O)O
InChI
InChI=1S/C15H22O5/c1-14(2,19)7-4-8-15(3,20)11-6-5-10(13(17)18)9-12(11)16/h5-6,9,16,19-20H,4,7-8H2,1-3H3,(H,17,18)
InChIKey
YCUWMGPYKGLQQF-UHFFFAOYSA-N
Synonyms
Hydroxysydonic acid; Sydonic acid, hydroxy-; (+/-)-hydroxysydonic acid; MLS000876960; G7S0F27G2L; Hydroxysydonic acid, (+/-)-; SMR000440676; Benzoic acid, 4-(1,5-dihydroxy-1,5-dimethylhexyl)-3-hydroxy-; 1649441-60-0; UNII-G7S0F27G2L; MEGxm0_000167; CHEMBL1305336; ACon0_000427; ACon1_002047; BDBM82882; cid_16745403; DTXSID001347378; HMS2270G20; NCGC00179884-01; Hydroxysydonic acid, >=95% (LC/MS-ELSD); BRD-A93280656-001-01-8; Q27896520; 4-(1,5-dihydroxy-1,5-dimethyl-hexyl)-3-hydroxy-benzoic acid; 4-(2,6-dihydroxy-6-methylheptan-2-yl)-3-hydroxybenzoic acid; 4-[6-methyl-2,6-bis(oxidanyl)heptan-2-yl]-3-oxidanyl-benzoic acid; NCGC00179884-02!4-(2,6-dihydroxy-6-methylheptan-2-yl)-3-hydroxybenzoic acid; 65967-72-8
CAS 1649441-60-0
PubChem CID 16745403
ChEMBL ID CHEMBL1305336
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 282.33 ALogp: 2.0
HBD: 4 HBA: 5
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 98.0 Aromatic Rings: 1
Heavy Atoms: 20 QED Weighted: 0.643

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.972 MDCK Permeability: 0.00001490
Pgp-inhibitor: 0.004 Pgp-substrate: 0.006
Human Intestinal Absorption (HIA): 0.028 20% Bioavailability (F20%): 0.01
30% Bioavailability (F30%): 0.014

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.1 Plasma Protein Binding (PPB): 51.92%
Volume Distribution (VD): 0.307 Fu: 47.30%

ADMET: Metabolism

CYP1A2-inhibitor: 0.018 CYP1A2-substrate: 0.548
CYP2C19-inhibitor: 0.023 CYP2C19-substrate: 0.053
CYP2C9-inhibitor: 0.051 CYP2C9-substrate: 0.17
CYP2D6-inhibitor: 0.014 CYP2D6-substrate: 0.121
CYP3A4-inhibitor: 0.038 CYP3A4-substrate: 0.07

ADMET: Excretion

Clearance (CL): 5.058 Half-life (T1/2): 0.896

ADMET: Toxicity

hERG Blockers: 0.043 Human Hepatotoxicity (H-HT): 0.162
Drug-inuced Liver Injury (DILI): 0.715 AMES Toxicity: 0.01
Rat Oral Acute Toxicity: 0.007 Maximum Recommended Daily Dose: 0.005
Skin Sensitization: 0.051 Carcinogencity: 0.013
Eye Corrosion: 0.004 Eye Irritation: 0.438
Respiratory Toxicity: 0.009
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002565 1.000 D05VIX 0.333
ENC002564 0.700 D0BA6T 0.319
ENC002688 0.672 D0K5CB 0.311
ENC005624 0.667 D02ZJI 0.311
ENC004442 0.667 D0P7JZ 0.306
ENC003401 0.645 D0Y6KO 0.289
ENC003302 0.625 D0C4YC 0.286
ENC005625 0.594 D01WJL 0.286
ENC003717 0.545 D0SS4P 0.276
ENC005626 0.493 D08HVR 0.271
*Note: the compound similarity was calculated by RDKIT.