NPs Basic Information

Name
(7S,11S)-(+)-12-Hydroxysydonic acid
Molecular Formula C15H22O5
IUPAC Name*
4-[(2R)-2,7-dihydroxy-6-methylheptan-2-yl]-3-hydroxybenzoic acid
SMILES
CC(CCC[C@](C)(C1=C(C=C(C=C1)C(=O)O)O)O)CO
InChI
InChI=1S/C15H22O5/c1-10(9-16)4-3-7-15(2,20)12-6-5-11(14(18)19)8-13(12)17/h5-6,8,10,16-17,20H,3-4,7,9H2,1-2H3,(H,18,19)/t10?,15-/m1/s1
InChIKey
ISHXRANDGDVGJS-GENIYJEYSA-N
Synonyms
(7S,11S)-(+)-12-Hydroxysydonic acid
CAS NA
PubChem CID 156583141
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 282.33 ALogp: 2.2
HBD: 4 HBA: 5
Rotatable Bonds: 7 Lipinski's rule of five: Accepted
Polar Surface Area: 98.0 Aromatic Rings: 1
Heavy Atoms: 20 QED Weighted: 0.616

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.955 MDCK Permeability: 0.00000649
Pgp-inhibitor: 0.003 Pgp-substrate: 0.012
Human Intestinal Absorption (HIA): 0.156 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.179

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.224 Plasma Protein Binding (PPB): 54.38%
Volume Distribution (VD): 0.303 Fu: 48.83%

ADMET: Metabolism

CYP1A2-inhibitor: 0.054 CYP1A2-substrate: 0.369
CYP2C19-inhibitor: 0.025 CYP2C19-substrate: 0.055
CYP2C9-inhibitor: 0.045 CYP2C9-substrate: 0.097
CYP2D6-inhibitor: 0.015 CYP2D6-substrate: 0.133
CYP3A4-inhibitor: 0.04 CYP3A4-substrate: 0.071

ADMET: Excretion

Clearance (CL): 3.828 Half-life (T1/2): 0.913

ADMET: Toxicity

hERG Blockers: 0.047 Human Hepatotoxicity (H-HT): 0.207
Drug-inuced Liver Injury (DILI): 0.87 AMES Toxicity: 0.007
Rat Oral Acute Toxicity: 0.012 Maximum Recommended Daily Dose: 0.007
Skin Sensitization: 0.069 Carcinogencity: 0.015
Eye Corrosion: 0.004 Eye Irritation: 0.461
Respiratory Toxicity: 0.018
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0BA6T 0.314
D0P7JZ 0.301
D05VIX 0.295
D0K5CB 0.289
D02ZJI 0.289
D08HVR 0.286
D0Y6KO 0.286
D0C4YC 0.281
D01WJL 0.281
D0I3RO 0.278
*Note: the compound similarity was calculated by RDKIT.