NPs Basic Information

Name
cis-2-Tridecene
Molecular Formula C13H26
IUPAC Name*
(Z)-tridec-2-ene
SMILES
CCCCCCCCCC/C=C\C
InChI
InChI=1S/C13H26/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3,5H,4,6-13H2,1-2H3/b5-3-
InChIKey
XWVHBWQEYOROBE-HYXAFXHYSA-N
Synonyms
cis-2-Tridecene; 2-Tridecene, (Z)-; (2Z)-2-Tridecene; 2-Tridecene, (Z); 2-Tridecene, (2Z)-; 41446-59-7; DA9736F843; (z)-2-tridecene; Z-2-TRIDECENE; .BETA.-CIS-TRIDECENE; UNII-DA9736F843; DTXSID00880864; Q27276306
CAS 41446-59-7
PubChem CID 5362714
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Unsaturated hydrocarbons
        • Subclass: Unsaturated aliphatic hyd
          • Direct Parent: Unsaturated aliphatic hyd

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 182.35 ALogp: 7.0
HBD: 0 HBA: 0
Rotatable Bonds: 9 Lipinski's rule of five: Rejected
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 13 QED Weighted: 0.33

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.66 MDCK Permeability: 0.00001770
Pgp-inhibitor: 0 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.818
30% Bioavailability (F30%): 0.996

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.696 Plasma Protein Binding (PPB): 97.79%
Volume Distribution (VD): 3.722 Fu: 2.69%

ADMET: Metabolism

CYP1A2-inhibitor: 0.826 CYP1A2-substrate: 0.453
CYP2C19-inhibitor: 0.543 CYP2C19-substrate: 0.235
CYP2C9-inhibitor: 0.297 CYP2C9-substrate: 0.942
CYP2D6-inhibitor: 0.296 CYP2D6-substrate: 0.492
CYP3A4-inhibitor: 0.278 CYP3A4-substrate: 0.108

ADMET: Excretion

Clearance (CL): 4.708 Half-life (T1/2): 0.57

ADMET: Toxicity

hERG Blockers: 0.119 Human Hepatotoxicity (H-HT): 0.033
Drug-inuced Liver Injury (DILI): 0.083 AMES Toxicity: 0.018
Rat Oral Acute Toxicity: 0.034 Maximum Recommended Daily Dose: 0.042
Skin Sensitization: 0.946 Carcinogencity: 0.053
Eye Corrosion: 0.989 Eye Irritation: 0.987
Respiratory Toxicity: 0.551
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001644 0.925 D0O1PH 0.451
ENC001684 0.838 D05ATI 0.448
ENC001655 0.721 D0Z5BC 0.404
ENC000273 0.690 D0Z5SM 0.400
ENC000275 0.690 D0Y8DP 0.393
ENC001685 0.660 D0O1TC 0.389
ENC000473 0.659 D05QNO 0.371
ENC000277 0.644 D07ILQ 0.366
ENC000510 0.644 D0OR6A 0.356
ENC001690 0.627 D0UE9X 0.343
*Note: the compound similarity was calculated by RDKIT.