NPs Basic Information

Name
Dimethyl succinate
Molecular Formula C6H10O4
IUPAC Name*
dimethyl butanedioate
SMILES
COC(=O)CCC(=O)OC
InChI
InChI=1S/C6H10O4/c1-9-5(7)3-4-6(8)10-2/h3-4H2,1-2H3
InChIKey
MUXOBHXGJLMRAB-UHFFFAOYSA-N
Synonyms
DIMETHYL SUCCINATE; 106-65-0; Dimethyl butanedioate; Dimethylsuccinate; Methyl succinate; Butanedioic acid, dimethyl ester; Succinic acid dimethyl ester; DBE-4 dibasic ester; Succinic acid, dimethyl ester; Methyl butanedioate; FEMA No. 2396; 1,4-dimethyl butanedioate; Butanedioic acid, 1,4-dimethyl ester; DBE-4; butanedioic acid dimethyl ester; Dimethyl ester of succinic acid; CH3OC(O)CH2CH2C(O)OCH3; NSC-52209; 914I2127JR; DSSTox_CID_5152; DSSTox_RID_77690; DSSTox_GSID_25152; CAS-106-65-0; CCRIS 4803; HSDB 5370; EINECS 203-419-9; NSC 52209; AI3-02480; UNII-914I2127JR; Succinic acid dimethyl; Dimethylsuccinate (DMS); dimethyl 1,4-butanedioate; EC 203-419-9; Succinic acid-dimethyl ester; SCHEMBL10213; MLS002454400; DBE-4 dibasic ester, 98%; Dimethyl Succinate (Fragrance); CHEMBL556489; Dimethyl succinate, 98%, FG; DIMETHYL SUCCINATE [FCC]; DTXSID5025152; FEMA 2396; DIMETHYL SUCCINATE [FHFI]; DIMETHYL SUCCINATE [HSDB]; DIMETHYL SUCCINATE [INCI]; CHEBI:165393; HMS2270G19; NSC52209; ZINC1683870; Tox21_202189; Tox21_300350; MFCD00008466; STL481902; AKOS000269071; Dimethyl succinate, analytical standard; NCGC00091530-01; NCGC00091530-02; NCGC00091530-03; NCGC00254517-01; NCGC00259738-01; LS-13155; SMR001253742; SUCCINIC ACID DIMETHYL ESTER [MI]; DB-059497; CS-0015787; Dimethyl succinate, purum, >=98.0% (GC); FT-0621972; EN300-113007; A904500; Dimethyl succinate, Vetec(TM) reagent grade, 98%; J-001620; Q27271375; F1905-7126
CAS 106-65-0
PubChem CID 7820
ChEMBL ID CHEMBL556489
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acid esters
          • Direct Parent: Fatty acid methyl esters

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 146.14 ALogp: 0.4
HBD: 0 HBA: 4
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 52.6 Aromatic Rings: 0
Heavy Atoms: 10 QED Weighted: 0.544

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.47 MDCK Permeability: 0.00024716
Pgp-inhibitor: 0.076 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.008
30% Bioavailability (F30%): 0.982

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.985 Plasma Protein Binding (PPB): 15.57%
Volume Distribution (VD): 0.51 Fu: 78.37%

ADMET: Metabolism

CYP1A2-inhibitor: 0.18 CYP1A2-substrate: 0.421
CYP2C19-inhibitor: 0.132 CYP2C19-substrate: 0.607
CYP2C9-inhibitor: 0.009 CYP2C9-substrate: 0.224
CYP2D6-inhibitor: 0.011 CYP2D6-substrate: 0.218
CYP3A4-inhibitor: 0.014 CYP3A4-substrate: 0.267

ADMET: Excretion

Clearance (CL): 8.166 Half-life (T1/2): 0.917

ADMET: Toxicity

hERG Blockers: 0.013 Human Hepatotoxicity (H-HT): 0.291
Drug-inuced Liver Injury (DILI): 0.356 AMES Toxicity: 0.016
Rat Oral Acute Toxicity: 0.008 Maximum Recommended Daily Dose: 0.085
Skin Sensitization: 0.409 Carcinogencity: 0.052
Eye Corrosion: 0.967 Eye Irritation: 0.865
Respiratory Toxicity: 0.034
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000735 0.581 D0OL6O 0.529
ENC001036 0.486 D0A7MY 0.368
ENC001253 0.410 D0Q7ZQ 0.300
ENC005496 0.400 D06VNK 0.278
ENC000516 0.391 D03RCJ 0.263
ENC000235 0.389 D0AY9Q 0.259
ENC006075 0.353 D0Y7ZD 0.256
ENC004525 0.351 D0O4GY 0.250
ENC000403 0.344 D0T5OX 0.247
ENC000758 0.341 D0K3LW 0.246
*Note: the compound similarity was calculated by RDKIT.