NPs Basic Information

Name
cladoscyclitol D
Molecular Formula C12H22O5
IUPAC Name*
5-(hydroxymethyl)-6-pentylcyclohex-5-ene-1,2,3,4-tetrol
SMILES
CCCCCC1=C(CO)C(O)C(O)C(O)C1O
InChI
InChI=1S/C12H22O5/c1-2-3-4-5-7-8(6-13)10(15)12(17)11(16)9(7)14/h9-17H,2-6H2,1H3/t9-,10-,11+,12+/m1/s1
InChIKey
BCTVNBAHSKQKRJ-WYUUTHIRSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Alcohols and polyols
          • Direct Parent: Cyclitols and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 246.3 ALogp: -0.7
HBD: 5 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 101.2 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.341

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.973 MDCK Permeability: 0.00120242
Pgp-inhibitor: 0.001 Pgp-substrate: 0.069
Human Intestinal Absorption (HIA): 0.875 20% Bioavailability (F20%): 0.088
30% Bioavailability (F30%): 0.449

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.669 Plasma Protein Binding (PPB): 54.76%
Volume Distribution (VD): 0.721 Fu: 46.28%

ADMET: Metabolism

CYP1A2-inhibitor: 0.047 CYP1A2-substrate: 0.046
CYP2C19-inhibitor: 0.01 CYP2C19-substrate: 0.068
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.167
CYP2D6-inhibitor: 0.003 CYP2D6-substrate: 0.108
CYP3A4-inhibitor: 0.003 CYP3A4-substrate: 0.024

ADMET: Excretion

Clearance (CL): 1.441 Half-life (T1/2): 0.544

ADMET: Toxicity

hERG Blockers: 0.026 Human Hepatotoxicity (H-HT): 0.065
Drug-inuced Liver Injury (DILI): 0.769 AMES Toxicity: 0.155
Rat Oral Acute Toxicity: 0.194 Maximum Recommended Daily Dose: 0.012
Skin Sensitization: 0.033 Carcinogencity: 0.03
Eye Corrosion: 0.003 Eye Irritation: 0.018
Respiratory Toxicity: 0.042
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004770 0.690 D0HR8Z 0.371
ENC004771 0.630 D0H3KI 0.288
ENC004769 0.552 D0D0ZD 0.281
ENC004172 0.528 D00HCQ 0.256
ENC004171 0.528 D0MU9L 0.254
ENC004173 0.416 D06BQU 0.250
ENC004787 0.388 D0H2RI 0.246
ENC004325 0.383 D07NSU 0.246
ENC003363 0.381 D07HZY 0.246
ENC004175 0.380 D04ZTY 0.243
*Note: the compound similarity was calculated by RDKIT.