NPs Basic Information

Name
Lobophorin CR3
Molecular Formula C61H90N2O23
IUPAC Name*
methyl N-[(2R,3R,4S,6R)-6-[[(1S,3R,6S,7E,9S,13S,16S,17S,18S,20S,21R,22S)-11-hydroperoxy-23-hydroxy-17-[(2R,4R,5S,6S)-5-hydroxy-4-[(2S,4R,5S,6R)-6-hydroxy-5-[(2S,4R,5R,6S)-4-hydroxy-5-methoxy-6-methyloxan-2-yl]oxy-4-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-4-(hydroxymethyl)-3,8,18,20,22-pentamethyl-12-methylidene-25,27-dioxo-26-oxapentacyclo[22.2.1.01,6.013,22.016,21]heptacosa-4,7,14,23-tetraen-9-yl]oxy]-2,4-dimethyl-4-nitrooxan-3-yl]carbamate
SMILES
C[C@H]1C[C@@H]([C@@H]([C@@H]2[C@@H]1[C@]3([C@@H](C=C2)C(=C)C(C[C@@H](/C(=C/[C@@H]4C=C([C@@H](C[C@@]45C(=O)C(=C3O)C(=O)O5)C)CO)/C)O[C@H]6C[C@]([C@H]([C@H](O6)C)NC(=O)OC)(C)[N+](=O)[O-])OO)C)O[C@H]7C[C@H]([C@H]([C@@H](O7)C)O)O[C@@H]8C[C@H]([C@@H]([C@@H](O8)O)O[C@H]9C[C@H]([C@H]([C@@H](O9)C)OC)O)C)C
InChI
InChI=1S/C61H90N2O23/c1-26-17-36-19-35(25-64)30(5)23-61(36)55(68)47(56(69)85-61)54(67)60(11)38(31(6)41(86-74)21-40(26)80-46-24-59(10,63(72)73)53(34(9)79-46)62-58(71)76-13)15-14-37-48(60)27(2)16-28(3)50(37)82-45-22-42(49(66)32(7)77-45)81-43-18-29(4)51(57(70)84-43)83-44-20-39(65)52(75-12)33(8)78-44/h14-15,17,19,27-30,32-34,36-46,48-53,57,64-67,70,74H,6,16,18,20-25H2,1-5,7-13H3,(H,62,71)/b26-17+,54-47?/t27-,28-,29+,30+,32-,33-,34+,36+,37-,38-,39+,40-,41?,42+,43-,44-,45-,46-,48+,49-,50-,51-,52-,53-,57+,59-,60+,61-/m0/s1
InChIKey
QYPVKZPVQCWZQL-ONZQNPCKSA-N
Synonyms
Lobophorin CR3
CAS NA
PubChem CID 156581183
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesterterpenoids
          • Direct Parent: Sesterterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 1219.4 ALogp: 4.4
HBD: 7 HBA: 23
Rotatable Bonds: 13 Lipinski's rule of five: Rejected
Polar Surface Area: 341.0 Aromatic Rings: 9
Heavy Atoms: 86 QED Weighted: 0.03

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.884 MDCK Permeability: 0.00076732
Pgp-inhibitor: 0.126 Pgp-substrate: 1
Human Intestinal Absorption (HIA): 0.865 20% Bioavailability (F20%): 0.001
30% Bioavailability (F30%): 0.782

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.03 Plasma Protein Binding (PPB): 79.23%
Volume Distribution (VD): 0.69 Fu: 10.42%

ADMET: Metabolism

CYP1A2-inhibitor: 0 CYP1A2-substrate: 0.909
CYP2C19-inhibitor: 0.012 CYP2C19-substrate: 0.506
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0
CYP2D6-inhibitor: 0 CYP2D6-substrate: 0.033
CYP3A4-inhibitor: 0.862 CYP3A4-substrate: 0.913

ADMET: Excretion

Clearance (CL): 4.789 Half-life (T1/2): 0.021

ADMET: Toxicity

hERG Blockers: 0.245 Human Hepatotoxicity (H-HT): 0.936
Drug-inuced Liver Injury (DILI): 0.99 AMES Toxicity: 0.971
Rat Oral Acute Toxicity: 0.988 Maximum Recommended Daily Dose: 0.998
Skin Sensitization: 0.235 Carcinogencity: 0.13
Eye Corrosion: 0.003 Eye Irritation: 0.004
Respiratory Toxicity: 0.992
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004293 0.946 D03KTD 0.395
ENC004292 0.832 D06EPF 0.358
ENC003730 0.783 D0P6IK 0.349
ENC003727 0.775 D0SL2V 0.349
ENC004223 0.775 D09HTS 0.343
ENC003621 0.774 D0L4SD 0.334
ENC003877 0.773 D07TGN 0.328
ENC003236 0.732 D0V3GA 0.323
ENC003639 0.708 D0Q6OS 0.322
ENC003260 0.502 D09YHJ 0.318
*Note: the compound similarity was calculated by RDKIT.