NPs Basic Information

Name
Colletobredin A
Molecular Formula C22H34O7
IUPAC Name*
(2S,3R,4R,5R,6S)-2-[[(3S)-6-hydroxy-5,7-dimethyl-3-pentyl-3,4-dihydro-1H-isochromen-8-yl]oxy]-6-methyloxane-3,4,5-triol
SMILES
CCCCC[C@H]1CC2=C(C(=C(C(=C2CO1)O[C@H]3[C@@H]([C@@H]([C@H]([C@@H](O3)C)O)O)O)C)O)C
InChI
InChI=1S/C22H34O7/c1-5-6-7-8-14-9-15-11(2)17(23)12(3)21(16(15)10-27-14)29-22-20(26)19(25)18(24)13(4)28-22/h13-14,18-20,22-26H,5-10H2,1-4H3/t13-,14-,18-,19+,20+,22-/m0/s1
InChIKey
FNBIMGWITQBHGT-BMRJRYBDSA-N
Synonyms
Colletobredin A
CAS NA
PubChem CID 139586693
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 410.5 ALogp: 2.7
HBD: 4 HBA: 7
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 109.0 Aromatic Rings: 3
Heavy Atoms: 29 QED Weighted: 0.534

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.159 MDCK Permeability: 0.00000576
Pgp-inhibitor: 0.042 Pgp-substrate: 0.995
Human Intestinal Absorption (HIA): 0.013 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.011

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.087 Plasma Protein Binding (PPB): 95.94%
Volume Distribution (VD): 0.841 Fu: 4.33%

ADMET: Metabolism

CYP1A2-inhibitor: 0.058 CYP1A2-substrate: 0.807
CYP2C19-inhibitor: 0.014 CYP2C19-substrate: 0.785
CYP2C9-inhibitor: 0.015 CYP2C9-substrate: 0.538
CYP2D6-inhibitor: 0.019 CYP2D6-substrate: 0.215
CYP3A4-inhibitor: 0.025 CYP3A4-substrate: 0.038

ADMET: Excretion

Clearance (CL): 5.022 Half-life (T1/2): 0.659

ADMET: Toxicity

hERG Blockers: 0.02 Human Hepatotoxicity (H-HT): 0.314
Drug-inuced Liver Injury (DILI): 0.033 AMES Toxicity: 0.524
Rat Oral Acute Toxicity: 0.164 Maximum Recommended Daily Dose: 0.224
Skin Sensitization: 0.929 Carcinogencity: 0.147
Eye Corrosion: 0.003 Eye Irritation: 0.056
Respiratory Toxicity: 0.695
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003582 0.904 D00HCQ 0.278
ENC003628 0.830 D0I9HF 0.271
ENC003625 0.677 D0TC7C 0.256
ENC003812 0.382 D0S0NK 0.254
ENC003811 0.382 D06BQU 0.252
ENC000851 0.326 D0Q0EX 0.248
ENC003669 0.324 D0HR8Z 0.240
ENC004787 0.318 D0R0ZL 0.238
ENC002302 0.318 D0P1FO 0.233
ENC003743 0.311 D0AR3J 0.232
*Note: the compound similarity was calculated by RDKIT.