NPs Basic Information

Name
Colletobredin C
Molecular Formula C22H34O8
IUPAC Name*
(2S,3R,4S,5S,6R)-2-[[(3S)-6-hydroxy-5,7-dimethyl-3-pentyl-3,4-dihydro-1H-isochromen-8-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES
CCCCC[C@H]1CC2=C(C(=C(C(=C2CO1)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)C)O)C
InChI
InChI=1S/C22H34O8/c1-4-5-6-7-13-8-14-11(2)17(24)12(3)21(15(14)10-28-13)30-22-20(27)19(26)18(25)16(9-23)29-22/h13,16,18-20,22-27H,4-10H2,1-3H3/t13-,16+,18+,19-,20+,22-/m0/s1
InChIKey
XUKJWPXLCBGIPO-AZAWAHRISA-N
Synonyms
Colletobredin C
CAS NA
PubChem CID 139584715
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbohydrates and carbohy
          • Direct Parent: Phenolic glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 426.5 ALogp: 2.2
HBD: 5 HBA: 8
Rotatable Bonds: 7 Lipinski's rule of five: Accepted
Polar Surface Area: 129.0 Aromatic Rings: 3
Heavy Atoms: 30 QED Weighted: 0.417

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.338 MDCK Permeability: 0.00000438
Pgp-inhibitor: 0.022 Pgp-substrate: 0.977
Human Intestinal Absorption (HIA): 0.255 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.033

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.114 Plasma Protein Binding (PPB): 94.70%
Volume Distribution (VD): 0.878 Fu: 4.26%

ADMET: Metabolism

CYP1A2-inhibitor: 0.036 CYP1A2-substrate: 0.661
CYP2C19-inhibitor: 0.009 CYP2C19-substrate: 0.645
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0.181
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.177
CYP3A4-inhibitor: 0.012 CYP3A4-substrate: 0.04

ADMET: Excretion

Clearance (CL): 4.43 Half-life (T1/2): 0.844

ADMET: Toxicity

hERG Blockers: 0.056 Human Hepatotoxicity (H-HT): 0.354
Drug-inuced Liver Injury (DILI): 0.023 AMES Toxicity: 0.676
Rat Oral Acute Toxicity: 0.362 Maximum Recommended Daily Dose: 0.106
Skin Sensitization: 0.93 Carcinogencity: 0.206
Eye Corrosion: 0.003 Eye Irritation: 0.033
Respiratory Toxicity: 0.06
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003707 0.830 D06BQU 0.343
ENC003625 0.822 D0S0NK 0.313
ENC003582 0.750 D0T5BC 0.309
ENC004787 0.423 D0H3KI 0.299
ENC000851 0.420 D01TNW 0.280
ENC004773 0.390 D06ALD 0.278
ENC001625 0.385 D0I9HF 0.258
ENC003068 0.368 D0HR8Z 0.258
ENC001062 0.368 D07NSU 0.256
ENC004291 0.366 D0H2RI 0.256
*Note: the compound similarity was calculated by RDKIT.