NPs Basic Information

Name
(1R,5R,6R)-4,5-dihydroxy-3-methyl-7-oxabicyclo[4.1.0]hept-3-en-2-one
Molecular Formula C7H8O4
IUPAC Name*
(1R,5R,6R)-4,5-dihydroxy-3-methyl-7-oxabicyclo[4.1.0]hept-3-en-2-one
SMILES
CC1=C([C@@H]([C@@H]2[C@H](C1=O)O2)O)O
InChI
InChI=1S/C7H8O4/c1-2-3(8)5(10)7-6(11-7)4(2)9/h5-8,10H,1H3/t5-,6-,7+/m0/s1
InChIKey
AEEKMAKCLFHLPJ-LYFYHCNISA-N
Synonyms
Terremutin
CAS NA
PubChem CID 101650345
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Cyclohexenones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 156.14 ALogp: -1.0
HBD: 2 HBA: 4
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 70.1 Aromatic Rings: 2
Heavy Atoms: 11 QED Weighted: 0.483

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.927 MDCK Permeability: 0.00032510
Pgp-inhibitor: 0 Pgp-substrate: 0.003
Human Intestinal Absorption (HIA): 0.04 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.403

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.963 Plasma Protein Binding (PPB): 44.10%
Volume Distribution (VD): 0.495 Fu: 63.68%

ADMET: Metabolism

CYP1A2-inhibitor: 0.032 CYP1A2-substrate: 0.245
CYP2C19-inhibitor: 0.032 CYP2C19-substrate: 0.511
CYP2C9-inhibitor: 0.005 CYP2C9-substrate: 0.099
CYP2D6-inhibitor: 0.008 CYP2D6-substrate: 0.23
CYP3A4-inhibitor: 0.006 CYP3A4-substrate: 0.2

ADMET: Excretion

Clearance (CL): 4.341 Half-life (T1/2): 0.39

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.135
Drug-inuced Liver Injury (DILI): 0.706 AMES Toxicity: 0.135
Rat Oral Acute Toxicity: 0.194 Maximum Recommended Daily Dose: 0.016
Skin Sensitization: 0.165 Carcinogencity: 0.119
Eye Corrosion: 0.033 Eye Irritation: 0.136
Respiratory Toxicity: 0.162
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003046 0.513 D0CL9S 0.250
ENC005552 0.425 D03KXY 0.233
ENC000788 0.415 D07AHW 0.224
ENC001986 0.382 D0R2KF 0.212
ENC000868 0.341 D09PZO 0.210
ENC002103 0.340 D0TS1Z 0.210
ENC005845 0.333 D01GYT 0.200
ENC002796 0.288 D0K7LU 0.200
ENC004880 0.278 D0Z8EX 0.197
ENC005568 0.278 D0X5XU 0.197
*Note: the compound similarity was calculated by RDKIT.