NPs Basic Information

Name
(4R,5R,6S)-3,4,5,6-tetrahydroxy-2-methylcyclohex-2-en-1-one
Molecular Formula C7H10O5
IUPAC Name*
(4R,5R,6S)-3,4,5,6-tetrahydroxy-2-methylcyclohex-2-en-1-one
SMILES
CC1=C([C@@H]([C@H]([C@@H](C1=O)O)O)O)O
InChI
InChI=1S/C7H10O5/c1-2-3(8)5(10)7(12)6(11)4(2)9/h5-8,10-12H,1H3/t5-,6+,7+/m0/s1
InChIKey
KUMBPQQUJPNQLZ-RRKCRQDMSA-N
Synonyms
73864-00-3; Terremutin hydrate; (4R,5R,6S)-3,4,5,6-Tetrahydroxy-2-methyl-2-cyclohexen-1-one
CAS NA
PubChem CID 90475719
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Cyclohexenones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 174.15 ALogp: -2.0
HBD: 4 HBA: 5
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 98.0 Aromatic Rings: 1
Heavy Atoms: 12 QED Weighted: 0.379

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.324 MDCK Permeability: 0.00126662
Pgp-inhibitor: 0 Pgp-substrate: 0.016
Human Intestinal Absorption (HIA): 0.588 20% Bioavailability (F20%): 0.01
30% Bioavailability (F30%): 0.107

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.904 Plasma Protein Binding (PPB): 27.59%
Volume Distribution (VD): 0.299 Fu: 56.46%

ADMET: Metabolism

CYP1A2-inhibitor: 0.018 CYP1A2-substrate: 0.085
CYP2C19-inhibitor: 0.02 CYP2C19-substrate: 0.123
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.411
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.142
CYP3A4-inhibitor: 0.005 CYP3A4-substrate: 0.059

ADMET: Excretion

Clearance (CL): 1.739 Half-life (T1/2): 0.567

ADMET: Toxicity

hERG Blockers: 0.017 Human Hepatotoxicity (H-HT): 0.049
Drug-inuced Liver Injury (DILI): 0.515 AMES Toxicity: 0.067
Rat Oral Acute Toxicity: 0.047 Maximum Recommended Daily Dose: 0.006
Skin Sensitization: 0.091 Carcinogencity: 0.015
Eye Corrosion: 0.003 Eye Irritation: 0.065
Respiratory Toxicity: 0.267
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003178 0.513 D07AHW 0.245
ENC005552 0.487 D07HZY 0.244
ENC000868 0.302 D05ZYM 0.232
ENC002664 0.302 D03KXY 0.230
ENC003001 0.302 D0Z4EI 0.229
ENC003445 0.292 D0MU9L 0.229
ENC003431 0.288 D07NSU 0.220
ENC005293 0.288 D0H2RI 0.220
ENC004788 0.286 D0H3KI 0.220
ENC004399 0.283 D0G5AG 0.219
*Note: the compound similarity was calculated by RDKIT.