NPs Basic Information

Name
(3r,6e,10s)-2,6,10-Trimethyl-3-hydroxydodeca-6,11-diene-2,10-diol
Molecular Formula C15H28O3
IUPAC Name*
(3R,6E,10S)-2,6,10-trimethyldodeca-6,11-diene-2,3,10-triol
SMILES
C/C(=C\CC[C@@](C)(C=C)O)/CC[C@H](C(C)(C)O)O
InChI
InChI=1S/C15H28O3/c1-6-15(5,18)11-7-8-12(2)9-10-13(16)14(3,4)17/h6,8,13,16-18H,1,7,9-11H2,2-5H3/b12-8+/t13-,15-/m1/s1
InChIKey
BGUYVWYUIXKRDO-OSEPDQNXSA-N
Synonyms
ZINC28539500; (3r,6e,10s)-2,6,10-trimethyl-3-hydroxydodeca-6,11-diene-2,10-diol
CAS NA
PubChem CID 35756045
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 256.38 ALogp: 2.3
HBD: 3 HBA: 3
Rotatable Bonds: 8 Lipinski's rule of five: Accepted
Polar Surface Area: 60.7 Aromatic Rings: 0
Heavy Atoms: 18 QED Weighted: 0.584

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.331 MDCK Permeability: 0.00001930
Pgp-inhibitor: 0.002 Pgp-substrate: 0.04
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.008
30% Bioavailability (F30%): 0.006

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.941 Plasma Protein Binding (PPB): 65.92%
Volume Distribution (VD): 1.025 Fu: 30.19%

ADMET: Metabolism

CYP1A2-inhibitor: 0.016 CYP1A2-substrate: 0.119
CYP2C19-inhibitor: 0.027 CYP2C19-substrate: 0.769
CYP2C9-inhibitor: 0.019 CYP2C9-substrate: 0.812
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.07
CYP3A4-inhibitor: 0.275 CYP3A4-substrate: 0.237

ADMET: Excretion

Clearance (CL): 6.15 Half-life (T1/2): 0.503

ADMET: Toxicity

hERG Blockers: 0.015 Human Hepatotoxicity (H-HT): 0.041
Drug-inuced Liver Injury (DILI): 0.011 AMES Toxicity: 0.007
Rat Oral Acute Toxicity: 0.039 Maximum Recommended Daily Dose: 0.935
Skin Sensitization: 0.635 Carcinogencity: 0.032
Eye Corrosion: 0.199 Eye Irritation: 0.89
Respiratory Toxicity: 0.297
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000314 0.544 D0D9NY 0.239
ENC001606 0.544 D05XQE 0.233
ENC004455 0.443 D0M1PQ 0.220
ENC001716 0.437 D02ZGI 0.219
ENC005923 0.418 D07SJT 0.217
ENC004068 0.358 D09XWD 0.194
ENC003948 0.343 D0T2PL 0.185
ENC004078 0.343 D02ZJI 0.182
ENC002414 0.310 D0SS4P 0.182
ENC002702 0.304 D0K5CB 0.182
*Note: the compound similarity was calculated by RDKIT.