NPs Basic Information

Name
trichodermamide C
Molecular Formula C21H22N2O9
IUPAC Name*
(4aS,5R,8R,8aS)-N-(7,8-dimethoxy-2-oxochromen-3-yl)-4a,5,8-trihydroxy-N-methyl-4,5,8,8a-tetrahydro-1,2-benzoxazine-3-carboxamide
SMILES
CN(C1=CC2=C(C(=C(C=C2)OC)OC)OC1=O)C(=O)C3=NO[C@H]4[C@@H](C=C[C@H]([C@]4(C3)O)O)O
InChI
InChI=1S/C21H22N2O9/c1-23(12-8-10-4-6-14(29-2)17(30-3)16(10)31-20(12)27)19(26)11-9-21(28)15(25)7-5-13(24)18(21)32-22-11/h4-8,13,15,18,24-25,28H,9H2,1-3H3/t13-,15-,18+,21+/m1/s1
InChIKey
PCMUPOUDXMFDRE-NYGSYELISA-N
Synonyms
trichodermamide C; CHEMBL262328; DTXSID50894032; Q63398568; (4aS,5R,8R,8aS)-N-(7,8-dimethoxy-2-oxochromen-3-yl)-4a,5,8-trihydroxy-N-methyl-4,5,8,8a-tetrahydro-1,2-benzoxazine-3-carboxamide
CAS NA
PubChem CID 25067253
ChEMBL ID CHEMBL262328
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Coumarins and derivatives
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Coumarins and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 446.4 ALogp: -0.4
HBD: 3 HBA: 10
Rotatable Bonds: 4 Lipinski's rule of five: Rejected
Polar Surface Area: 147.0 Aromatic Rings: 4
Heavy Atoms: 32 QED Weighted: 0.446

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.284 MDCK Permeability: 0.00003710
Pgp-inhibitor: 0.073 Pgp-substrate: 0.269
Human Intestinal Absorption (HIA): 0.905 20% Bioavailability (F20%): 0.894
30% Bioavailability (F30%): 0.994

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.605 Plasma Protein Binding (PPB): 56.80%
Volume Distribution (VD): 1.27 Fu: 28.54%

ADMET: Metabolism

CYP1A2-inhibitor: 0.043 CYP1A2-substrate: 0.951
CYP2C19-inhibitor: 0.027 CYP2C19-substrate: 0.392
CYP2C9-inhibitor: 0.017 CYP2C9-substrate: 0.445
CYP2D6-inhibitor: 0.007 CYP2D6-substrate: 0.485
CYP3A4-inhibitor: 0.072 CYP3A4-substrate: 0.162

ADMET: Excretion

Clearance (CL): 1.719 Half-life (T1/2): 0.252

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.607
Drug-inuced Liver Injury (DILI): 0.977 AMES Toxicity: 0.11
Rat Oral Acute Toxicity: 0.162 Maximum Recommended Daily Dose: 0.036
Skin Sensitization: 0.071 Carcinogencity: 0.116
Eye Corrosion: 0.003 Eye Irritation: 0.008
Respiratory Toxicity: 0.098
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002091 0.776 D08SKH 0.288
ENC004309 0.611 D06GCK 0.287
ENC002347 0.522 D0L1JW 0.273
ENC003738 0.417 D03DIG 0.269
ENC003545 0.411 D0W8WB 0.268
ENC003540 0.402 D09DHY 0.263
ENC003539 0.398 D0G4KG 0.259
ENC003659 0.398 D0Q0PR 0.255
ENC004276 0.381 D0D4HN 0.254
ENC004283 0.378 D04TDQ 0.254
*Note: the compound similarity was calculated by RDKIT.