NPs Basic Information

Name
(Z)-caryophyllene
Molecular Formula C15H24
IUPAC Name*
(1S,4E,9S)-4,11,11-trimethyl-8-methylidenebicyclo[7.2.0]undec-4-ene
SMILES
C/C/1=C\CCC(=C)[C@H]2CC([C@H]2CC1)(C)C
InChI
InChI=1S/C15H24/c1-11-6-5-7-12(2)13-10-15(3,4)14(13)9-8-11/h6,13-14H,2,5,7-10H2,1,3-4H3/b11-6+/t13-,14+/m1/s1
InChIKey
NPNUFJAVOOONJE-BLOBHPOZSA-N
Synonyms
(Z)-caryophyllene; (Z)-.beta.-caryophyllene; caryophyllene (z-); 9-epicaryophyllene; 9-epi-Caryophyllene; CHEBI:172932; CHEBI:192813; ZINC49586678; AKOS030492450
CAS NA
PubChem CID 6429301
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 204.35 ALogp: 4.4
HBD: 0 HBA: 0
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 2
Heavy Atoms: 15 QED Weighted: 0.478

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.588 MDCK Permeability: 0.00002220
Pgp-inhibitor: 0.654 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.004 20% Bioavailability (F20%): 0.909
30% Bioavailability (F30%): 0.01

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.89 Plasma Protein Binding (PPB): 91.55%
Volume Distribution (VD): 2.51 Fu: 6.71%

ADMET: Metabolism

CYP1A2-inhibitor: 0.49 CYP1A2-substrate: 0.465
CYP2C19-inhibitor: 0.452 CYP2C19-substrate: 0.784
CYP2C9-inhibitor: 0.348 CYP2C9-substrate: 0.822
CYP2D6-inhibitor: 0.088 CYP2D6-substrate: 0.773
CYP3A4-inhibitor: 0.109 CYP3A4-substrate: 0.265

ADMET: Excretion

Clearance (CL): 6.823 Half-life (T1/2): 0.067

ADMET: Toxicity

hERG Blockers: 0.04 Human Hepatotoxicity (H-HT): 0.198
Drug-inuced Liver Injury (DILI): 0.255 AMES Toxicity: 0.005
Rat Oral Acute Toxicity: 0.059 Maximum Recommended Daily Dose: 0.816
Skin Sensitization: 0.629 Carcinogencity: 0.212
Eye Corrosion: 0.684 Eye Irritation: 0.877
Respiratory Toxicity: 0.652
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001630 1.000 D0L2LS 0.262
ENC001563 1.000 D0D2VS 0.259
ENC001565 1.000 D0K0EK 0.250
ENC001663 0.673 D06CGB 0.247
ENC002652 0.519 D0A2AJ 0.247
ENC002199 0.519 D0Z1XD 0.244
ENC001469 0.491 D0F2AK 0.241
ENC001297 0.446 D0C7JF 0.241
ENC002990 0.414 D00ZFP 0.241
ENC001316 0.414 D04ATM 0.236
*Note: the compound similarity was calculated by RDKIT.