NPs Basic Information

Name
(Z)-3,7,11-Trimethyldodec-2-enoic acid, methyl ester
Molecular Formula C16H30O2
IUPAC Name*
methyl (Z)-3,7,11-trimethyldodec-2-enoate
SMILES
CC(C)CCCC(C)CCC/C(=C\C(=O)OC)/C
InChI
InChI=1S/C16H30O2/c1-13(2)8-6-9-14(3)10-7-11-15(4)12-16(17)18-5/h12-14H,6-11H2,1-5H3/b15-12-
InChIKey
VMWXOXCIPIMPLA-QINSGFPZSA-N
Synonyms
(Z)-3,7,11-Trimethyldodec-2-enoic acid, methyl ester
CAS NA
PubChem CID 6421673
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 254.41 ALogp: 6.3
HBD: 0 HBA: 2
Rotatable Bonds: 10 Lipinski's rule of five: Rejected
Polar Surface Area: 26.3 Aromatic Rings: 0
Heavy Atoms: 18 QED Weighted: 0.419

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.404 MDCK Permeability: 0.00002020
Pgp-inhibitor: 0.645 Pgp-substrate: 0.008
Human Intestinal Absorption (HIA): 0.002 20% Bioavailability (F20%): 0.929
30% Bioavailability (F30%): 0.884

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.411 Plasma Protein Binding (PPB): 97.62%
Volume Distribution (VD): 1.904 Fu: 2.99%

ADMET: Metabolism

CYP1A2-inhibitor: 0.776 CYP1A2-substrate: 0.635
CYP2C19-inhibitor: 0.802 CYP2C19-substrate: 0.877
CYP2C9-inhibitor: 0.934 CYP2C9-substrate: 0.917
CYP2D6-inhibitor: 0.182 CYP2D6-substrate: 0.093
CYP3A4-inhibitor: 0.542 CYP3A4-substrate: 0.215

ADMET: Excretion

Clearance (CL): 3.405 Half-life (T1/2): 0.37

ADMET: Toxicity

hERG Blockers: 0.026 Human Hepatotoxicity (H-HT): 0.238
Drug-inuced Liver Injury (DILI): 0.065 AMES Toxicity: 0.003
Rat Oral Acute Toxicity: 0.011 Maximum Recommended Daily Dose: 0.049
Skin Sensitization: 0.956 Carcinogencity: 0.046
Eye Corrosion: 0.93 Eye Irritation: 0.885
Respiratory Toxicity: 0.583
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000815 0.667 D00FSV 0.350
ENC001286 0.571 D0ZI4H 0.257
ENC001412 0.548 D03LGY 0.232
ENC001818 0.548 D03JSJ 0.231
ENC001722 0.522 D0U5CE 0.225
ENC000536 0.492 D03LGG 0.225
ENC000622 0.492 D04MWJ 0.210
ENC000537 0.468 D0D9NY 0.207
ENC000354 0.457 D00WUF 0.206
ENC000766 0.446 D0X4FM 0.206
*Note: the compound similarity was calculated by RDKIT.