NPs Basic Information

Name
Penitrem E
Molecular Formula C37H45NO6
IUPAC Name*
(1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25R,27S,28R)-15,16,33,33-tetramethyl-24-methylidene-10-prop-1-en-2-yl-7,11,32-trioxa-18-azadecacyclo[25.4.2.02,16.05,15.06,8.06,12.017,31.019,30.022,29.025,28]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9,28-triol
SMILES
CC(=C)[C@@H]1[C@@H]([C@@H]2[C@@]3(O2)[C@@H](O1)CC[C@]4([C@]3(CC[C@@H]5[C@@]4(C6=C7[C@H]5OC([C@H]8C[C@H]9[C@@]8(C1=C(CC9=C)C=CC(=C71)N6)O)(C)C)C)O)C)O
InChI
InChI=1S/C37H45NO6/c1-16(2)28-27(39)31-37(44-31)23(42-28)11-12-33(6)34(7)19(10-13-35(33,37)40)29-25-24-21(38-30(25)34)9-8-18-14-17(3)20-15-22(32(4,5)43-29)36(20,41)26(18)24/h8-9,19-20,22-23,27-29,31,38-41H,1,3,10-15H2,2,4-7H3/t19-,20+,22+,23-,27-,28+,29-,31+,33+,34+,35-,36+,37-/m0/s1
InChIKey
LTCFBVUSILPMGG-BRSLXYMHSA-N
Synonyms
Penitrem E; 78213-66-8; (1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25R,27S,28R)-15,16,33,33-tetramethyl-24-methylidene-10-prop-1-en-2-yl-7,11,32-trioxa-18-azadecacyclo[25.4.2.02,16.05,15.06,8.06,12.017,31.019,30.022,29.025,28]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9,28-triol; 6-Dechloropenitrem A; Penitrem A, 6-dechloro-; CHEMBL3220347; DTXSID10999456; CHEBI:190264; 7,8-(Epoxymethano)-2H,6H-cyclobuta(5,6)benz(1,2-e)oxireno(4',4'a)-1-benzopyrano(5',6':6,7)indeno(1,2-b)indole-3,4b,7d(5H,7H)-triol,3,3a,6a,8,9,9a,10,11,14,14b,14c,15,16,16a-tetradecahydro-14b,14c,17,17-tetramethyl-10-methylene-2-(1-methylethenyl)-, (2R,3S,3aR,4aS,4bS,6aR,7S,7dR,8S,9aR,14bS,14cR,16aS)-; C20597; 8,8,15a,15b-Tetramethyl-10-methylidene-2-(prop-1-en-2-yl)-3,3a,6,6a,6b,8,8a,9,9a,10,11,15a,15b,16,17,17a-hexadecahydro-2H,4bH-14,15-epiminobenzo[fg]cyclobuta[kl]indeno[1,2-d][3]benzoxocine-3,4b,11c(5H)-triol
CAS 78213-66-8
PubChem CID 3086087
ChEMBL ID CHEMBL3220347
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Naphthopyrans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Naphthopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 599.8 ALogp: 3.5
HBD: 4 HBA: 6
Rotatable Bonds: 1 Lipinski's rule of five: Rejected
Polar Surface Area: 108.0 Aromatic Rings: 10
Heavy Atoms: 44 QED Weighted: 0.26

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.386 MDCK Permeability: 0.00000904
Pgp-inhibitor: 0.977 Pgp-substrate: 0.994
Human Intestinal Absorption (HIA): 0.037 20% Bioavailability (F20%): 0.804
30% Bioavailability (F30%): 0.928

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.954 Plasma Protein Binding (PPB): 85.14%
Volume Distribution (VD): 2.113 Fu: 6.76%

ADMET: Metabolism

CYP1A2-inhibitor: 0.022 CYP1A2-substrate: 0.967
CYP2C19-inhibitor: 0.07 CYP2C19-substrate: 0.626
CYP2C9-inhibitor: 0.181 CYP2C9-substrate: 0.062
CYP2D6-inhibitor: 0.029 CYP2D6-substrate: 0.645
CYP3A4-inhibitor: 0.657 CYP3A4-substrate: 0.876

ADMET: Excretion

Clearance (CL): 5.749 Half-life (T1/2): 0.071

ADMET: Toxicity

hERG Blockers: 0.931 Human Hepatotoxicity (H-HT): 0.797
Drug-inuced Liver Injury (DILI): 0.355 AMES Toxicity: 0.025
Rat Oral Acute Toxicity: 0.985 Maximum Recommended Daily Dose: 0.99
Skin Sensitization: 0.198 Carcinogencity: 0.93
Eye Corrosion: 0.003 Eye Irritation: 0.011
Respiratory Toxicity: 0.988
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001891 0.836 D0KR9U 0.227
ENC001499 0.779 D0W2EK 0.220
ENC001507 0.671 D0Y2YP 0.219
ENC003831 0.656 D06IIB 0.219
ENC005404 0.641 D0AR3J 0.219
ENC001486 0.572 D0M2QH 0.217
ENC003830 0.546 D02JNM 0.214
ENC003833 0.528 D0X7XG 0.214
ENC003453 0.497 D06AEO 0.214
ENC003330 0.434 D05VIL 0.214
*Note: the compound similarity was calculated by RDKIT.