NPs Basic Information

Name
Cyclodecane
Molecular Formula C10H20
IUPAC Name*
cyclodecane
SMILES
C1CCCCCCCCC1
InChI
InChI=1S/C10H20/c1-2-4-6-8-10-9-7-5-3-1/h1-10H2
InChIKey
LMGZGXSXHCMSAA-UHFFFAOYSA-N
Synonyms
CYCLODECANE; 293-96-9; 9N3JJ4GTR5; EINECS 206-032-3; cyclodecan; Cyclodecane, >=90%; UNII-9N3JJ4GTR5; DTXSID7059779; MFCD00003711; ZINC71613926; AKOS015915993; DB-047574; FT-0624160; D89414; A820228; Q118815; J-017495
CAS 293-96-9
PubChem CID 9267
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Cycloalkanes
          • Direct Parent: Cycloalkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 140.27 ALogp: 5.6
HBD: 0 HBA: 0
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 1
Heavy Atoms: 10 QED Weighted: 0.463

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.684 MDCK Permeability: 0.00001870
Pgp-inhibitor: 0.004 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.339
30% Bioavailability (F30%): 0.988

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.863 Plasma Protein Binding (PPB): 96.61%
Volume Distribution (VD): 2.821 Fu: 2.90%

ADMET: Metabolism

CYP1A2-inhibitor: 0.896 CYP1A2-substrate: 0.22
CYP2C19-inhibitor: 0.561 CYP2C19-substrate: 0.09
CYP2C9-inhibitor: 0.238 CYP2C9-substrate: 0.931
CYP2D6-inhibitor: 0.064 CYP2D6-substrate: 0.143
CYP3A4-inhibitor: 0.094 CYP3A4-substrate: 0.072

ADMET: Excretion

Clearance (CL): 4.086 Half-life (T1/2): 0.179

ADMET: Toxicity

hERG Blockers: 0.114 Human Hepatotoxicity (H-HT): 0.024
Drug-inuced Liver Injury (DILI): 0.304 AMES Toxicity: 0.028
Rat Oral Acute Toxicity: 0.051 Maximum Recommended Daily Dose: 0.041
Skin Sensitization: 0.948 Carcinogencity: 0.098
Eye Corrosion: 0.992 Eye Irritation: 0.98
Respiratory Toxicity: 0.889
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000324 0.833 D00SBN 0.286
ENC000893 0.769 D0N3PE 0.273
ENC000840 0.638 D08VSI 0.256
ENC001017 0.600 D0S5NG 0.247
ENC000251 0.600 D07XJM 0.240
ENC001146 0.500 D09GFL 0.234
ENC001147 0.417 D0L0MK 0.209
ENC000170 0.375 D0R1WR 0.195
ENC001230 0.313 D02LRQ 0.195
ENC005710 0.302 D04URO 0.186
*Note: the compound similarity was calculated by RDKIT.