NPs Basic Information

Name
pericinone A
Molecular Formula C30H48O3
IUPAC Name*
12,15-dihydroxy-4,4,10,13,14-pentamethyl-17-(6-methylhept-5-en-2-yl)-1,2,5,6,7,11,12,15,16,17-decahydrocyclopenta[a]phenanthren-3-one
SMILES
CC(C)=CCCC(C)C1CC(O)C2(C)C3=C(CC(O)C12C)C1(C)CCC(=O)C(C)(C)C1CC3
InChI
InChI=1S/C30H48O3/c1-18(2)10-9-11-19(3)21-16-25(32)29(7)20-12-13-23-27(4,5)24(31)14-15-28(23,6)22(20)17-26(33)30(21,29)8/h10,19,21,23,25-26,32-33H,9,11-17H2,1-8H3/t19-,21-,23+,25+,26-,28-,29-,30+/m1/s1
InChIKey
ATOOQSPBGOMWAR-YYPDEHINSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Triterpenoids
          • Direct Parent: Triterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 456.71 ALogp: 6.6
HBD: 2 HBA: 3
Rotatable Bonds: 4 Lipinski's rule of five: Rejected
Polar Surface Area: 57.5 Aromatic Rings: 4
Heavy Atoms: 33 QED Weighted: 0.47

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.954 MDCK Permeability: 0.00001290
Pgp-inhibitor: 0.731 Pgp-substrate: 0.008
Human Intestinal Absorption (HIA): 0.024 20% Bioavailability (F20%): 0.963
30% Bioavailability (F30%): 0.933

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.972 Plasma Protein Binding (PPB): 97.46%
Volume Distribution (VD): 1.176 Fu: 2.95%

ADMET: Metabolism

CYP1A2-inhibitor: 0.015 CYP1A2-substrate: 0.56
CYP2C19-inhibitor: 0.052 CYP2C19-substrate: 0.966
CYP2C9-inhibitor: 0.143 CYP2C9-substrate: 0.95
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.396
CYP3A4-inhibitor: 0.301 CYP3A4-substrate: 0.517

ADMET: Excretion

Clearance (CL): 16.794 Half-life (T1/2): 0.032

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.446
Drug-inuced Liver Injury (DILI): 0.03 AMES Toxicity: 0.023
Rat Oral Acute Toxicity: 0.173 Maximum Recommended Daily Dose: 0.504
Skin Sensitization: 0.022 Carcinogencity: 0.125
Eye Corrosion: 0.003 Eye Irritation: 0.032
Respiratory Toxicity: 0.963
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006069 0.804 D0X7XG 0.299
ENC002119 0.488 D0H2MO 0.280
ENC002075 0.415 D0T2PL 0.278
ENC002152 0.359 D08SVH 0.278
ENC001582 0.338 D0W2EK 0.273
ENC005285 0.336 D04VIS 0.268
ENC002168 0.329 D0OR2L 0.265
ENC003486 0.329 D06IIB 0.265
ENC001119 0.329 D02VPX 0.263
ENC003755 0.320 D03ZTE 0.260
*Note: the compound similarity was calculated by RDKIT.