NPs Basic Information

Name
5-(2-formyl-5-methoxymethylpyrrol-1-yl)pentanoic acid methyl ester
Molecular Formula C13H19NO4
IUPAC Name*
methyl5-[2-formyl-5-(methoxymethyl)pyrrol-1-yl]pentanoate
SMILES
COCc1ccc(C=O)n1CCCCC(=O)OC
InChI
InChI=1S/C13H19NO4/c1-17-10-12-7-6-11(9-15)14(12)8-4-3-5-13(16)18-2/h6-7,9H,3-5,8,10H2,1-2H3
InChIKey
VEFBAKRDMAWSFG-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acid esters
          • Direct Parent: Fatty acid methyl esters

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 253.3 ALogp: 1.8
HBD: 0 HBA: 5
Rotatable Bonds: 8 Lipinski's rule of five: Accepted
Polar Surface Area: 57.5 Aromatic Rings: 1
Heavy Atoms: 18 QED Weighted: 0.405

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.572 MDCK Permeability: 0.00002500
Pgp-inhibitor: 0.004 Pgp-substrate: 0.026
Human Intestinal Absorption (HIA): 0.343 20% Bioavailability (F20%): 0.025
30% Bioavailability (F30%): 0.359

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.705 Plasma Protein Binding (PPB): 35.80%
Volume Distribution (VD): 1.062 Fu: 63.81%

ADMET: Metabolism

CYP1A2-inhibitor: 0.433 CYP1A2-substrate: 0.664
CYP2C19-inhibitor: 0.512 CYP2C19-substrate: 0.674
CYP2C9-inhibitor: 0.124 CYP2C9-substrate: 0.139
CYP2D6-inhibitor: 0.008 CYP2D6-substrate: 0.329
CYP3A4-inhibitor: 0.055 CYP3A4-substrate: 0.324

ADMET: Excretion

Clearance (CL): 6.734 Half-life (T1/2): 0.886

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.05
Drug-inuced Liver Injury (DILI): 0.115 AMES Toxicity: 0.032
Rat Oral Acute Toxicity: 0.013 Maximum Recommended Daily Dose: 0.089
Skin Sensitization: 0.095 Carcinogencity: 0.279
Eye Corrosion: 0.011 Eye Irritation: 0.245
Respiratory Toxicity: 0.172
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000235 0.370 D03XTC 0.271
ENC004428 0.365 D09QEI 0.268
ENC001036 0.362 D05PHH 0.267
ENC001696 0.361 D0UU9Y 0.264
ENC000253 0.356 D03LGG 0.261
ENC004483 0.352 D0U5CE 0.261
ENC003542 0.346 D0G2KD 0.258
ENC004671 0.338 D0T5OX 0.250
ENC000516 0.333 D0OL6O 0.246
ENC000249 0.323 D09ANG 0.240
*Note: the compound similarity was calculated by RDKIT.