NPs Basic Information

Name
5,9-dihydroxy-2,4,6,8,10-pentamethyldodeca-2,6,10-trienal
Molecular Formula C17H28O3
IUPAC Name*
5,9-dihydroxy-2,4,6,8,10-pentamethyldodeca-2,6,10-trienal
SMILES
CC=C(C)C(O)C(C)C=C(C)C(O)C(C)C=C(C)C=O
InChI
InChI=1S/C17H28O3/c1-7-12(3)16(19)14(5)9-15(6)17(20)13(4)8-11(2)10-18/h7-10,13-14,16-17,19-20H,1-6H3/b11-8+,12-7+,15-9+
InChIKey
VOGAFVFYRPIPRX-KCMYJDAASA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 280.41 ALogp: 3.0
HBD: 2 HBA: 3
Rotatable Bonds: 7 Lipinski's rule of five: Accepted
Polar Surface Area: 57.5 Aromatic Rings: 0
Heavy Atoms: 20 QED Weighted: 0.423

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.686 MDCK Permeability: 0.00000918
Pgp-inhibitor: 0.002 Pgp-substrate: 0.552
Human Intestinal Absorption (HIA): 0.59 20% Bioavailability (F20%): 0.556
30% Bioavailability (F30%): 0.725

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.612 Plasma Protein Binding (PPB): 84.98%
Volume Distribution (VD): 1.773 Fu: 6.02%

ADMET: Metabolism

CYP1A2-inhibitor: 0.062 CYP1A2-substrate: 0.238
CYP2C19-inhibitor: 0.019 CYP2C19-substrate: 0.884
CYP2C9-inhibitor: 0.008 CYP2C9-substrate: 0.824
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.489
CYP3A4-inhibitor: 0.054 CYP3A4-substrate: 0.317

ADMET: Excretion

Clearance (CL): 9.594 Half-life (T1/2): 0.544

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.507
Drug-inuced Liver Injury (DILI): 0.067 AMES Toxicity: 0.014
Rat Oral Acute Toxicity: 0.014 Maximum Recommended Daily Dose: 0.214
Skin Sensitization: 0.056 Carcinogencity: 0.04
Eye Corrosion: 0.004 Eye Irritation: 0.129
Respiratory Toxicity: 0.704
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005725 0.380 D05QDC 0.186
ENC001847 0.351 D02DGU 0.183
ENC005723 0.328 D0G3PI 0.183
ENC005161 0.303 D00DKK 0.183
ENC005724 0.299 D09XWD 0.172
ENC005286 0.296 D05XQE 0.168
ENC001732 0.262 D0B1IP 0.163
ENC005823 0.257 D0S7WX 0.161
ENC005822 0.257 D0L5FY 0.160
ENC004634 0.256 D0RA5Q 0.158
*Note: the compound similarity was calculated by RDKIT.