NPs Basic Information

Name
Piericidin A
Molecular Formula C25H37NO4
IUPAC Name*
2-[(2E,5E,7E,9R,10R,11E)-10-hydroxy-3,7,9,11-tetramethyltrideca-2,5,7,11-tetraenyl]-5,6-dimethoxy-3-methyl-1H-pyridin-4-one
SMILES
C/C=C(\C)/[C@@H]([C@H](C)/C=C(\C)/C=C/C/C(=C/CC1=C(C(=O)C(=C(N1)OC)OC)C)/C)O
InChI
InChI=1S/C25H37NO4/c1-9-18(4)22(27)19(5)15-17(3)12-10-11-16(2)13-14-21-20(6)23(28)24(29-7)25(26-21)30-8/h9-10,12-13,15,19,22,27H,11,14H2,1-8H3,(H,26,28)/b12-10+,16-13+,17-15+,18-9+/t19-,22+/m1/s1
InChIKey
BBLGCDSLCDDALX-LKGBESRRSA-N
Synonyms
Piericidin A; Piericidin A1; Shaoguanmycin B; 2738-64-9; Piericidine A; SN 198E; 8VT513UJ9R; CHEMBL272733; 2-[(2E,5E,7E,9R,10R,11E)-10-hydroxy-3,7,9,11-tetramethyltrideca-2,5,7,11-tetraenyl]-5,6-dimethoxy-3-methyl-1H-pyridin-4-one; Piericidin; BRN 1555726; UNII-8VT513UJ9R; AR 054; PIERICIDINA; (+)-piericidin A1; 4-Pyridinol, 2-(10-hydroxy-3,7,9,11-tetramethyl-2,5,7,11-tridecatetraenyl)-5,6-dimethoxy-3-methyl-, (R-(R*,R*-(all-E)))-; MEGxm0_000313; PIERICIDIN A, (+)-; SCHEMBL18941698; SCHEMBL19717606; ACon0_001227; ACon1_001455; DTXSID80880044; SN-198E; CHEBI:138511; HQH; BDBM50411905; ZINC14655907; NCGC00180489-01; 2,6,9,11-Tridecatetraen-4-ol, 13-(4-hydroxy-5,6-dimethoxy-3-methyl-2-pyridyl)-3,5,7,11-tetramethyl-, (all-E)-(4R,5R)-; 4-Pyridinol, 2-((2E,5E,7E,9R,10R,11E)-10-hydroxy-3,7,9,11-tetramethyl-2,5,7,11-tridecatetraenyl)-5,6-dimethoxy-3-methyl-; HY-114936; CS-0064672; J-016753; Q7191888; BRD-K73581776-001-01-6; Piericidin A from Streptomyces mobaraensis, >=90.0% (HPLC), liquid, green-yellow; 19855-42-6; 2-[(2E,5E,7E,11E)-10R-hydroxy-3,7,9R,11-tetramethyl-2,5,7,11-tridecatetraen-1-yl]-5,6-dimethoxy-3-methyl-4-pyridinol; 2-[(2E,5E,7E,9R,10R,11E)-10-hydroxy-3,7,9,11-tetramethyltrideca-2,5,7,11-tetraen-1-yl]-5,6-dimethoxy-3-methylpyridin-4-ol; 4-PYRIDINOL, 2-((2E,5E,7E,9R,10R,11E)-10-HYDROXY-3,7,9,11-TETRAMETHYL-2,5,7,11-TRIDECATETRAEN-1-YL)-5,6-DIMETHOXY-3-METHYL-
CAS 2738-64-9
PubChem CID 6437838
ChEMBL ID CHEMBL272733
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 415.6 ALogp: 6.1
HBD: 2 HBA: 5
Rotatable Bonds: 10 Lipinski's rule of five: Accepted
Polar Surface Area: 67.8 Aromatic Rings: 1
Heavy Atoms: 30 QED Weighted: 0.398

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.655 MDCK Permeability: 0.00001230
Pgp-inhibitor: 0.018 Pgp-substrate: 0.546
Human Intestinal Absorption (HIA): 0.027 20% Bioavailability (F20%): 0.026
30% Bioavailability (F30%): 0.024

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.033 Plasma Protein Binding (PPB): 96.93%
Volume Distribution (VD): 0.366 Fu: 1.62%

ADMET: Metabolism

CYP1A2-inhibitor: 0.389 CYP1A2-substrate: 0.954
CYP2C19-inhibitor: 0.738 CYP2C19-substrate: 0.87
CYP2C9-inhibitor: 0.725 CYP2C9-substrate: 0.967
CYP2D6-inhibitor: 0.896 CYP2D6-substrate: 0.899
CYP3A4-inhibitor: 0.914 CYP3A4-substrate: 0.752

ADMET: Excretion

Clearance (CL): 3.943 Half-life (T1/2): 0.553

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.184
Drug-inuced Liver Injury (DILI): 0.547 AMES Toxicity: 0.005
Rat Oral Acute Toxicity: 0.026 Maximum Recommended Daily Dose: 0.839
Skin Sensitization: 0.948 Carcinogencity: 0.017
Eye Corrosion: 0.004 Eye Irritation: 0.264
Respiratory Toxicity: 0.113
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002660 0.652 D0B1IP 0.271
ENC003820 0.517 D05QDC 0.263
ENC003819 0.425 D0L5FY 0.232
ENC004854 0.375 D04FBR 0.210
ENC004855 0.352 D0WY9N 0.200
ENC005021 0.351 D0S7WX 0.191
ENC004634 0.309 D00WVW 0.188
ENC006092 0.291 D0G3PI 0.188
ENC005286 0.288 D02DGU 0.188
ENC005161 0.272 D00DKK 0.188
*Note: the compound similarity was calculated by RDKIT.