NPs Basic Information

Name
Pysarone A
Molecular Formula C13H16O5
IUPAC Name*
(3S,4S,5R,5aR,8aS)-4-hydroxy-5-methoxy-3-methyl-4,5,5a,7,8,8a-hexahydro-3H-pentaleno[1,2-c]pyran-1,6-dione
SMILES
C[C@H]1[C@H](C2=C([C@H]3CCC(=O)[C@H]3[C@H]2OC)C(=O)O1)O
InChI
InChI=1S/C13H16O5/c1-5-11(15)10-9(13(16)18-5)6-3-4-7(14)8(6)12(10)17-2/h5-6,8,11-12,15H,3-4H2,1-2H3/t5-,6-,8-,11+,12+/m0/s1
InChIKey
HHAQCJVEHVPEJC-JXCMNVCGSA-N
Synonyms
Pysarone A
CAS NA
PubChem CID 146684411
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Dihydropyranones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 252.26 ALogp: -1.1
HBD: 1 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 72.8 Aromatic Rings: 3
Heavy Atoms: 18 QED Weighted: 0.692

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.875 MDCK Permeability: 0.00002300
Pgp-inhibitor: 0 Pgp-substrate: 0.059
Human Intestinal Absorption (HIA): 0.021 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.06

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.654 Plasma Protein Binding (PPB): 71.30%
Volume Distribution (VD): 0.7 Fu: 27.43%

ADMET: Metabolism

CYP1A2-inhibitor: 0.03 CYP1A2-substrate: 0.931
CYP2C19-inhibitor: 0.011 CYP2C19-substrate: 0.89
CYP2C9-inhibitor: 0.013 CYP2C9-substrate: 0.791
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.332
CYP3A4-inhibitor: 0.01 CYP3A4-substrate: 0.386

ADMET: Excretion

Clearance (CL): 2.116 Half-life (T1/2): 0.256

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.529
Drug-inuced Liver Injury (DILI): 0.616 AMES Toxicity: 0.017
Rat Oral Acute Toxicity: 0.443 Maximum Recommended Daily Dose: 0.432
Skin Sensitization: 0.259 Carcinogencity: 0.165
Eye Corrosion: 0.003 Eye Irritation: 0.013
Respiratory Toxicity: 0.378
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005043 0.338 D0K7LU 0.241
ENC004882 0.328 D0X5KF 0.231
ENC002669 0.314 D03KXY 0.221
ENC003237 0.311 D04JHN 0.211
ENC005556 0.293 D0A2AJ 0.207
ENC004992 0.293 D0G6AB 0.207
ENC004880 0.290 D00YWP 0.205
ENC004881 0.290 D0T6RC 0.204
ENC005568 0.290 D03SKD 0.200
ENC003225 0.290 D0I5DS 0.196
*Note: the compound similarity was calculated by RDKIT.