NPs Basic Information

Name
Cyclonerotriol B
Molecular Formula C15H28O3
IUPAC Name*
(Z,6R)-6-[(1S,2R,3S)-3-hydroxy-2,3-dimethylcyclopentyl]-2-methylhept-3-ene-2,6-diol
SMILES
C[C@@H]1[C@H](CC[C@]1(C)O)[C@@](C)(C/C=C\C(C)(C)O)O
InChI
InChI=1S/C15H28O3/c1-11-12(7-10-14(11,4)17)15(5,18)9-6-8-13(2,3)16/h6,8,11-12,16-18H,7,9-10H2,1-5H3/b8-6-/t11-,12+,14+,15-/m1/s1
InChIKey
GXIOKIVWOMSPIP-QGSMABSNSA-N
Synonyms
Cyclonerotriol B
CAS NA
PubChem CID 146682795
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 256.38 ALogp: 1.6
HBD: 3 HBA: 3
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 60.7 Aromatic Rings: 1
Heavy Atoms: 18 QED Weighted: 0.678

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.649 MDCK Permeability: 0.00001750
Pgp-inhibitor: 0.002 Pgp-substrate: 0.023
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.312
30% Bioavailability (F30%): 0.023

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.922 Plasma Protein Binding (PPB): 53.14%
Volume Distribution (VD): 0.777 Fu: 43.22%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.235
CYP2C19-inhibitor: 0.032 CYP2C19-substrate: 0.845
CYP2C9-inhibitor: 0.022 CYP2C9-substrate: 0.531
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.145
CYP3A4-inhibitor: 0.065 CYP3A4-substrate: 0.375

ADMET: Excretion

Clearance (CL): 6.337 Half-life (T1/2): 0.855

ADMET: Toxicity

hERG Blockers: 0.033 Human Hepatotoxicity (H-HT): 0.103
Drug-inuced Liver Injury (DILI): 0.038 AMES Toxicity: 0.007
Rat Oral Acute Toxicity: 0.008 Maximum Recommended Daily Dose: 0.025
Skin Sensitization: 0.358 Carcinogencity: 0.14
Eye Corrosion: 0.342 Eye Irritation: 0.974
Respiratory Toxicity: 0.011
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004079 0.614 D07QKN 0.279
ENC004078 0.593 D02ZGI 0.208
ENC003948 0.593 D0N1TP 0.208
ENC000952 0.525 D0T2PL 0.208
ENC002414 0.500 D05BTM 0.208
ENC003627 0.379 D02VPX 0.200
ENC002289 0.368 D0W6DG 0.182
ENC002827 0.368 D06AWE 0.176
ENC004727 0.324 D0H2JP 0.176
ENC002684 0.324 D0F7NQ 0.169
*Note: the compound similarity was calculated by RDKIT.