NPs Basic Information

Name
Rhizovarin B
Molecular Formula C38H46ClNO7
IUPAC Name*
(1S,3S,7S,9R,10S,11R,16S,17S,26R,28S,29R)-22-chloro-3-methoxy-16,17,34,34-tetramethyl-25-methylidene-11-prop-1-en-2-yl-2,8,12,33-tetraoxa-19-azadecacyclo[26.4.2.03,17.06,16.07,9.07,13.018,32.020,31.023,30.026,29]tetratriaconta-18(32),20,22,30-tetraene-10,29-diol
SMILES
CC(=C)[C@@H]1[C@@H]([C@@H]2[C@]3(O2)C4CC[C@]5([C@@]([C@]4(CCC3O1)C)(C6=C7[C@H](O5)OC([C@H]8C[C@H]9[C@@]8(C1=C7C(=CC(=C1CC9=C)Cl)N6)O)(C)C)C)OC)O
InChI
InChI=1S/C38H46ClNO7/c1-16(2)29-28(41)31-38(45-31)22-9-12-36(43-8)35(7,34(22,6)11-10-24(38)44-29)30-26-25-21(40-30)15-20(39)18-13-17(3)19-14-23(37(19,42)27(18)25)33(4,5)46-32(26)47-36/h15,19,22-24,28-29,31-32,40-42H,1,3,9-14H2,2,4-8H3/t19-,22?,23-,24?,28+,29-,31-,32+,34+,35-,36+,37-,38+/m1/s1
InChIKey
WUURQODECZYJHH-GQWXIHMDSA-N
Synonyms
Rhizovarin B
CAS NA
PubChem CID 139589619
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Naphthopyrans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Naphthopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 664.2 ALogp: 4.3
HBD: 3 HBA: 7
Rotatable Bonds: 2 Lipinski's rule of five: Rejected
Polar Surface Area: 106.0 Aromatic Rings: 10
Heavy Atoms: 47 QED Weighted: 0.258

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.266 MDCK Permeability: 0.00001180
Pgp-inhibitor: 0.995 Pgp-substrate: 0.992
Human Intestinal Absorption (HIA): 0.017 20% Bioavailability (F20%): 0.01
30% Bioavailability (F30%): 0.126

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.951 Plasma Protein Binding (PPB): 91.88%
Volume Distribution (VD): 2.254 Fu: 2.41%

ADMET: Metabolism

CYP1A2-inhibitor: 0.018 CYP1A2-substrate: 0.995
CYP2C19-inhibitor: 0.148 CYP2C19-substrate: 0.84
CYP2C9-inhibitor: 0.354 CYP2C9-substrate: 0.039
CYP2D6-inhibitor: 0.03 CYP2D6-substrate: 0.469
CYP3A4-inhibitor: 0.858 CYP3A4-substrate: 0.914

ADMET: Excretion

Clearance (CL): 8.007 Half-life (T1/2): 0.013

ADMET: Toxicity

hERG Blockers: 0.89 Human Hepatotoxicity (H-HT): 0.973
Drug-inuced Liver Injury (DILI): 0.878 AMES Toxicity: 0.128
Rat Oral Acute Toxicity: 0.976 Maximum Recommended Daily Dose: 0.993
Skin Sensitization: 0.566 Carcinogencity: 0.841
Eye Corrosion: 0.003 Eye Irritation: 0.01
Respiratory Toxicity: 0.988
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003831 0.843 D03MTN 0.221
ENC005404 0.704 D0W2EK 0.217
ENC001891 0.660 D06IIB 0.216
ENC001508 0.546 D0KR9U 0.212
ENC001507 0.527 D0X7XG 0.212
ENC003453 0.448 D06AEO 0.211
ENC001499 0.445 D0Y2YP 0.209
ENC001486 0.380 D0S0NK 0.204
ENC003833 0.344 D0V3GA 0.204
ENC003330 0.337 D0M2QH 0.202
*Note: the compound similarity was calculated by RDKIT.