NPs Basic Information

Name
Penitrem B
Molecular Formula C37H45NO5
IUPAC Name*
(1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25S,27S,28S)-15,16,33,33-tetramethyl-24-methylidene-10-prop-1-en-2-yl-7,11,32-trioxa-18-azadecacyclo[25.4.2.02,16.05,15.06,8.06,12.017,31.019,30.022,29.025,28]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9-diol
SMILES
CC(=C)[C@@H]1[C@@H]([C@@H]2[C@@]3(O2)[C@@H](O1)CC[C@]4([C@]3(CC[C@@H]5[C@@]4(C6=C7[C@H]5OC([C@H]8C[C@H]9[C@@H]8C1=C(CC9=C)C=CC(=C17)N6)(C)C)C)O)C)O
InChI
InChI=1S/C37H45NO5/c1-16(2)29-28(39)32-37(43-32)23(41-29)11-12-34(6)35(7)20(10-13-36(34,37)40)30-27-26-22(38-31(27)35)9-8-18-14-17(3)19-15-21(25(19)24(18)26)33(4,5)42-30/h8-9,19-21,23,25,28-30,32,38-40H,1,3,10-15H2,2,4-7H3/t19-,20+,21+,23+,25+,28+,29-,30+,32-,34-,35-,36+,37+/m1/s1
InChIKey
CRPJNVUYZRFGAK-WKAGVDCZSA-N
Synonyms
Penitrem B; 11076-67-8; Tremortin B; BRN 5325727; PENITREMB; CHEMBL445727; DTXSID00911849; CHEBI:138831; C20731; (1S,2R,5S,6S,8R,9S,10R,12S,15R,16S,25S,27S,28S)-15,16,33,33-tetramethyl-24-methylidene-10-prop-1-en-2-yl-7,11,32-trioxa-18-azadecacyclo[25.4.2.02,16.05,15.06,8.06,12.017,31.019,30.022,29.025,28]tritriaconta-17(31),19(30),20,22(29)-tetraene-5,9-diol; 8,8,15a,15b-Tetramethyl-10-methylidene-2-(prop-1-en-2-yl)-3,3a,5,6,6a,6b,8,8a,9,9a,10,11,11c,15a,15b,16,17,17a-octadecahydro-2H,4bH-14,15-epiminobenzo[fg]cyclobuta[kl]indeno[1,2-d][3]benzoxocine-3,4b-diol
CAS 11076-67-8
PubChem CID 3084087
ChEMBL ID CHEMBL445727
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Naphthopyrans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Naphthopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 583.8 ALogp: 4.5
HBD: 3 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Rejected
Polar Surface Area: 87.2 Aromatic Rings: 10
Heavy Atoms: 43 QED Weighted: 0.284

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.34 MDCK Permeability: 0.00001020
Pgp-inhibitor: 0.904 Pgp-substrate: 0.996
Human Intestinal Absorption (HIA): 0.012 20% Bioavailability (F20%): 0.736
30% Bioavailability (F30%): 0.537

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.906 Plasma Protein Binding (PPB): 88.65%
Volume Distribution (VD): 2.258 Fu: 6.26%

ADMET: Metabolism

CYP1A2-inhibitor: 0.032 CYP1A2-substrate: 0.966
CYP2C19-inhibitor: 0.177 CYP2C19-substrate: 0.771
CYP2C9-inhibitor: 0.248 CYP2C9-substrate: 0.062
CYP2D6-inhibitor: 0.057 CYP2D6-substrate: 0.511
CYP3A4-inhibitor: 0.788 CYP3A4-substrate: 0.916

ADMET: Excretion

Clearance (CL): 7.931 Half-life (T1/2): 0.021

ADMET: Toxicity

hERG Blockers: 0.974 Human Hepatotoxicity (H-HT): 0.422
Drug-inuced Liver Injury (DILI): 0.777 AMES Toxicity: 0.017
Rat Oral Acute Toxicity: 0.979 Maximum Recommended Daily Dose: 0.98
Skin Sensitization: 0.37 Carcinogencity: 0.929
Eye Corrosion: 0.003 Eye Irritation: 0.012
Respiratory Toxicity: 0.991
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001507 0.833 D06AEO 0.240
ENC001508 0.779 D06IIB 0.229
ENC001486 0.730 D0W2EK 0.223
ENC001891 0.671 D0Y2YP 0.222
ENC003833 0.616 D04GJN 0.221
ENC003453 0.615 D0I2SD 0.221
ENC003831 0.521 D0L2LS 0.217
ENC005404 0.509 D02JNM 0.217
ENC003330 0.484 D0KR9U 0.216
ENC003830 0.445 D0P0HT 0.215
*Note: the compound similarity was calculated by RDKIT.