NPs Basic Information

Name
Emericellene B
Molecular Formula C25H38O3
IUPAC Name*
(1R,3E,7E,11R,12S,15S)-4,8-dimethyl-15-(4-methylpent-3-enyl)spiro[bicyclo[9.3.1]pentadeca-3,7-diene-12,2'-oxirane]-15-carboxylic acid
SMILES
C/C/1=C\CC/C(=C/C[C@H]2CC[C@@]3(CO3)[C@@H]([C@@]2(CCC=C(C)C)C(=O)O)CC1)/C
InChI
InChI=1S/C25H38O3/c1-18(2)7-6-15-25(23(26)27)21-12-10-19(3)8-5-9-20(4)11-13-22(25)24(16-14-21)17-28-24/h7,9-10,21-22H,5-6,8,11-17H2,1-4H3,(H,26,27)/b19-10+,20-9+/t21-,22-,24+,25-/m0/s1
InChIKey
OWVLOVXPEXDJOR-DFICHUKNSA-N
Synonyms
Emericellene B
CAS NA
PubChem CID 139588257
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesterterpenoids
          • Direct Parent: Sesterterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 386.6 ALogp: 5.1
HBD: 1 HBA: 3
Rotatable Bonds: 4 Lipinski's rule of five: Rejected
Polar Surface Area: 49.8 Aromatic Rings: 3
Heavy Atoms: 28 QED Weighted: 0.448

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.215 MDCK Permeability: 0.00001190
Pgp-inhibitor: 0.024 Pgp-substrate: 0.953
Human Intestinal Absorption (HIA): 0.015 20% Bioavailability (F20%): 0.023
30% Bioavailability (F30%): 0.619

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.075 Plasma Protein Binding (PPB): 96.72%
Volume Distribution (VD): 1.054 Fu: 4.02%

ADMET: Metabolism

CYP1A2-inhibitor: 0.028 CYP1A2-substrate: 0.138
CYP2C19-inhibitor: 0.071 CYP2C19-substrate: 0.775
CYP2C9-inhibitor: 0.405 CYP2C9-substrate: 0.939
CYP2D6-inhibitor: 0.042 CYP2D6-substrate: 0.121
CYP3A4-inhibitor: 0.174 CYP3A4-substrate: 0.078

ADMET: Excretion

Clearance (CL): 4.657 Half-life (T1/2): 0.17

ADMET: Toxicity

hERG Blockers: 0.02 Human Hepatotoxicity (H-HT): 0.828
Drug-inuced Liver Injury (DILI): 0.007 AMES Toxicity: 0
Rat Oral Acute Toxicity: 0.003 Maximum Recommended Daily Dose: 0.215
Skin Sensitization: 0.968 Carcinogencity: 0.074
Eye Corrosion: 0.127 Eye Irritation: 0.357
Respiratory Toxicity: 0.911
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003698 0.767 D02CNR 0.252
ENC003731 0.674 D0X7XG 0.239
ENC003655 0.674 D04GJN 0.239
ENC003799 0.621 D0V2JK 0.238
ENC003150 0.409 D0B4RU 0.237
ENC003502 0.370 D07BSQ 0.237
ENC001455 0.348 D08TEJ 0.236
ENC001812 0.347 D02CJX 0.236
ENC001981 0.341 D0FG6M 0.235
ENC001827 0.326 D00AEQ 0.235
*Note: the compound similarity was calculated by RDKIT.