NPs Basic Information

Name
(4R,5R,6E,8S,9R)-5-[(E)-2-Methyl-2-butenoyloxy]-4,8,9-trihydroxy-6-decenoic acid 1,4-lactone
Molecular Formula C15H22O6
IUPAC Name*
[(E,1R,4S,5R)-4,5-dihydroxy-1-[(2R)-5-oxooxolan-2-yl]hex-2-enyl] (E)-2-methylbut-2-enoate
SMILES
C/C=C(\C)/C(=O)O[C@H](/C=C/[C@@H]([C@@H](C)O)O)[C@H]1CCC(=O)O1
InChI
InChI=1S/C15H22O6/c1-4-9(2)15(19)21-13(6-5-11(17)10(3)16)12-7-8-14(18)20-12/h4-6,10-13,16-17H,7-8H2,1-3H3/b6-5+,9-4+/t10-,11+,12-,13-/m1/s1
InChIKey
KDJQJYVWRNNMAM-SUOUKJKBSA-N
Synonyms
(1R,2E,4S,5R)-1-[(2R)-5-oxotetrahydrofuran-2-yl]-4,5-dihydroxy-hex-2-en-1-yl(2E)-2-methylbut-2-enoate; (4R,5R,6E,8S,9R)-5-[(E)-2-Methyl-2-butenoyloxy]-4,8,9-trihydroxy-6-decenoic acid 1,4-lactone
CAS NA
PubChem CID 122372757
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty alcohols
          • Direct Parent: Fatty alcohols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 298.33 ALogp: 0.8
HBD: 2 HBA: 6
Rotatable Bonds: 7 Lipinski's rule of five: Accepted
Polar Surface Area: 93.1 Aromatic Rings: 1
Heavy Atoms: 21 QED Weighted: 0.436

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.905 MDCK Permeability: 0.00007770
Pgp-inhibitor: 0.006 Pgp-substrate: 0.015
Human Intestinal Absorption (HIA): 0.968 20% Bioavailability (F20%): 0.026
30% Bioavailability (F30%): 0.986

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.707 Plasma Protein Binding (PPB): 75.94%
Volume Distribution (VD): 0.764 Fu: 11.41%

ADMET: Metabolism

CYP1A2-inhibitor: 0.11 CYP1A2-substrate: 0.151
CYP2C19-inhibitor: 0.117 CYP2C19-substrate: 0.401
CYP2C9-inhibitor: 0.067 CYP2C9-substrate: 0.836
CYP2D6-inhibitor: 0.026 CYP2D6-substrate: 0.127
CYP3A4-inhibitor: 0.18 CYP3A4-substrate: 0.223

ADMET: Excretion

Clearance (CL): 2.162 Half-life (T1/2): 0.879

ADMET: Toxicity

hERG Blockers: 0.018 Human Hepatotoxicity (H-HT): 0.681
Drug-inuced Liver Injury (DILI): 0.511 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.358 Maximum Recommended Daily Dose: 0.836
Skin Sensitization: 0.156 Carcinogencity: 0.047
Eye Corrosion: 0.003 Eye Irritation: 0.015
Respiratory Toxicity: 0.057
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003192 1.000 D0E9KA 0.200
ENC003191 0.647 D0ZI4H 0.195
ENC001863 0.474 D0S8LV 0.192
ENC005693 0.341 D02IIW 0.187
ENC001864 0.333 D05ZTH 0.185
ENC005821 0.301 D0N3NO 0.182
ENC005692 0.300 D0T8LY 0.173
ENC005531 0.280 D00NPP 0.172
ENC000899 0.278 D0Q4TK 0.171
ENC005196 0.278 D02RQU 0.171
*Note: the compound similarity was calculated by RDKIT.